RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 C18orf12Q96KH6 178 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 LINC00615Q96LM1 132 aaPredicted RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 IMMP1LQ96LU5 166 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 IL17FQ96PD4 163 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 DNAJC7Q99615 494 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 VKORC1Q9BQB6 163 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 POLDIP3Q9BY77 421 aaKnown RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 SLC25A51Q9H1U9 297 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 HAUS4Q9H6D7 363 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 MRM3Q9HC36 420 aaKnown RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 GLOD4Q9HC38 313 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 PRR13Q9NZ81 148 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 C3orf18Q9UK00 162 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 TDRKHQ9Y2W6 561 aaKnown RBP5□□□□□ -1.61
PTPN4-209ENST00000469511 ATP6V1DQ9Y5K8 247 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 ARL5AQ9Y689 179 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 PRSS21Q9Y6M0 314 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 MXRA5Q9NR99 2828 aa5□□□□□ -1.61
PTPN4-209ENST00000469511 A0A1B0GTH9 108 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 HYKKA2RU49 373 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 IDSB3KWA1 339 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 INAFM1C9JVW0 142 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 KLK8O60259 260 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 ZRANB2O95218 330 aaKnown RBP eCLIP4.99□□□□□ -1.61
PTPN4-209ENST00000469511 ZWINTO95229 277 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 AGTP01019 485 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 TP53P04637 393 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-209ENST00000469511 F13BP05160 661 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 HEXAP06865 529 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 C8BP07358 591 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 SKILP12757 684 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 DESP17661 470 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 CD247P20963 164 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 ACADLP28330 430 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 ADSLP30566 484 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-209ENST00000469511 HOXC12P31275 282 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 RFC3P40938 356 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 SSR1P43307 286 aaKnown RBP4.99□□□□□ -1.61
PTPN4-209ENST00000469511 CARSP49589 748 aaKnown RBP4.99□□□□□ -1.61
PTPN4-209ENST00000469511 PRLHRP49683 370 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 EMP2P54851 167 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 NUP107P57740 925 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 VSX2P58304 361 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-209ENST00000469511 AP1B1Q10567 949 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 TUBA3CQ13748 450 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 LONRF2Q1L5Z9 754 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 KRTCAP3Q53RY4 240 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 EMC4Q5J8M3 183 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 NKAPLQ5M9Q1 402 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 WASHC2DQ5SRD0 308 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 ABHD17BQ5VST6 288 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 CDKAL1Q5VV42 579 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 CES4AQ5XG92 561 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 TUBA3EQ6PEY2 450 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 CNSTQ6PJW8 725 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 SARM1Q6SZW1 724 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 LANCL3Q6ZV70 420 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 NLRP9Q7RTR0 991 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 HOOK3Q86VS8 718 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 JAZF1Q86VZ6 243 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 ZNF227Q86WZ6 799 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 CDC20BQ86Y33 519 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 PHC2Q8IXK0 858 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 NEK11Q8NG66 645 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 OR13C4Q8NGS5 318 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 PIWIL2Q8TC59 973 aaKnown RBP4.99□□□□□ -1.61
PTPN4-209ENST00000469511 RAPGEF5Q92565 580 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 NINJ1Q92982 152 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.99□□□□□ -1.61
PTPN4-209ENST00000469511 FAF2Q96CS3 445 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 SCMH1Q96GD3 660 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 C10orf90Q96M02 699 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 ZNF285Q96NJ3 590 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 CCM2Q9BSQ5 444 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 MENTQ9BUN1 341 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 CHRNA10Q9GZZ6 450 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 RNF32Q9H0A6 362 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 ASB8Q9H765 288 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 MVB12BQ9H7P6 319 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 ZNF304Q9HCX3 659 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 SMOXQ9NWM0 555 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 KCNN3Q9UGI6 736 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 L3MBTL1Q9Y468 752 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 HEY1Q9Y5J3 304 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 HEBP2Q9Y5Z4 205 aa4.99□□□□□ -1.61
PTPN4-209ENST00000469511 ANK3Q12955 4377 aaKnown RBP4.98□□□□□ -1.61
PTPN4-209ENST00000469511 IGLV3-12A0A075B6K2 115 aa4.98□□□□□ -1.61
PTPN4-209ENST00000469511 A0A0J9YVX5 310 aa4.98□□□□□ -1.61
PTPN4-209ENST00000469511 FAM237BA0A1B0GVD1 139 aa4.98□□□□□ -1.61
PTPN4-209ENST00000469511 A0A1W2PPR1 153 aa4.98□□□□□ -1.61
PTPN4-209ENST00000469511 A0A1W2PQ72 361 aa4.98□□□□□ -1.61
PTPN4-209ENST00000469511 LRRC53A6NM62 1247 aa4.98□□□□□ -1.61
PTPN4-209ENST00000469511 AGAP14A8MT82 685 aa4.98□□□□□ -1.61
PTPN4-209ENST00000469511 TTI1O43156 1089 aa4.98□□□□□ -1.61
PTPN4-209ENST00000469511 NEURL1O76050 574 aa4.98□□□□□ -1.61
PTPN4-209ENST00000469511 PDE9AO76083 593 aa4.98□□□□□ -1.61
PTPN4-209ENST00000469511 SRP72O76094 671 aaKnown RBP4.98□□□□□ -1.61
PTPN4-209ENST00000469511 SEC24DO94855 1032 aaPredicted RBP4.98□□□□□ -1.61
PTPN4-209ENST00000469511 IGLV1-40P01703 118 aa4.98□□□□□ -1.61
PTPN4-209ENST00000469511 UQCRHP07919 91 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms