RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-209	ENST00000468872	LSG1	Q9H089	658 aa	Known RBP	4.57	□□□□□ -1.68
LSM5-209	ENST00000468872	CHST11	Q9NPF2	352 aa		4.57	□□□□□ -1.68
LSM5-209	ENST00000468872	INTS9	Q9NV88	658 aa	Known RBP	4.57	□□□□□ -1.68
LSM5-209	ENST00000468872	PKD2L2	Q9NZM6	624 aa		4.57	□□□□□ -1.68
LSM5-209	ENST00000468872	FLRT3	Q9NZU0	649 aa		4.57	□□□□□ -1.68
LSM5-209	ENST00000468872	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.57	□□□□□ -1.68
LSM5-209	ENST00000468872	MTRR	Q9UBK8	725 aa		4.57	□□□□□ -1.68
LSM5-209	ENST00000468872	CHKB	Q9Y259	395 aa		4.57	□□□□□ -1.68
LSM5-209	ENST00000468872	HBS1L	Q9Y450	684 aa	Known RBP	4.57	□□□□□ -1.68
LSM5-209	ENST00000468872	KLK4	Q9Y5K2	254 aa		4.57	□□□□□ -1.68
LSM5-209	ENST00000468872	C2CD4D	B7Z1M9	353 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	KBTBD13	C9JR72	458 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	NTN3	O00634	580 aa	Predicted RBP	4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	FPGT	O14772	594 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	DFFB	O76075	338 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	ATP6V1B1	P15313	513 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	TIMP3	P35625	211 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	FRK	P42685	505 aa	Predicted RBP	4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	RCN2	Q14257	317 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	SMU1	Q2TAY7	513 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	FAM46C	Q5VWP2	391 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	SLC35E4	Q6ICL7	350 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	CTR9	Q6PD62	1173 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	SLC16A9	Q7RTY1	509 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	PIGW	Q7Z7B1	504 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	CARNMT1	Q8N4J0	409 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	OR13C3	Q8NGS6	347 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	OR4C3	Q8NH37	302 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	LRRC8C	Q8TDW0	803 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	CENPT	Q96BT3	561 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	PIGQ	Q9BRB3	760 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	SRD5A3	Q9H8P0	318 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	IL1RAPL2	Q9NP60	686 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	SLCO1C1	Q9NYB5	712 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	GPR132	Q9UNW8	380 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	MADD	Q8WXG6	1647 aa		4.56	□□□□□ -1.68
LSM5-209	ENST00000468872	TRBV5-5	A0A0J9YX44	114 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	PRR23A	A6NEV1	266 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	SDR42E2	A6NKP2	422 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	SMIM1	B2RUZ4	78 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	NADK	O95544	446 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	CAVIN2	O95810	425 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	GH1	P01241	217 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	GPI	P06744	558 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	ERVK-10	P10266	1014 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	F3	P13726	295 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	LHCGR	P22888	699 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	ITGA3	P26006	1051 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	DUT	P33316	252 aa	Known RBP	4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	ADAR	P55265	1226 aa	Known RBP	4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	SNU13	P55769	128 aa	Known RBP	4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	PHEX	P78562	749 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	IL10RB	Q08334	325 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	KIAA1644	Q3SXP7	199 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	KBTBD12	Q3ZCT8	623 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	ODF2	Q5BJF6	829 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	XKR6	Q5GH73	641 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	UGT3A1	Q6NUS8	523 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	MEX3D	Q86XN8	651 aa	Known RBP	4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	UNC45B	Q8IWX7	931 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	KIRREL3	Q8IZU9	778 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	C10orf53	Q8N6V4	93 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	LRTM2	Q8N967	370 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	NAT8L	Q8N9F0	302 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	CCDC63	Q8NA47	563 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	MSANTD4	Q8NCY6	345 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	HPSE2	Q8WWQ2	592 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	SNRNP40	Q96DI7	357 aa	Known RBP	4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	C4orf45	Q96LM5	186 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	KLHL5	Q96PQ7	755 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	MTMR12	Q9C0I1	747 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	SDCBP2	Q9H190	292 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	RIMS4	Q9H426	269 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	IARS2	Q9NSE4	1012 aa	Known RBP	4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	KCNJ14	Q9UNX9	436 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872		R4GN57	208 aa		4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	BAZ1B	Q9UIG0	1483 aa	Known RBP	4.55	□□□□□ -1.68
LSM5-209	ENST00000468872	LRRD1	A4D1F6	860 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	TMEM150C	B9EJG8	249 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	MOCS2	O96007	188 aa	Predicted RBP	4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	PRSS1	P07477	247 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	DLAT	P10515	647 aa	Known RBP	4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	CD59	P13987	128 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	ALDH4A1	P30038	563 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	OR3A1	P47881	315 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	NPBWR1	P48145	328 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	HILS1	P60008	231 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	HERV-K104	P61576	105 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	CDR2	Q01850	454 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	PPP2R5C	Q13362	524 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	MORF4L2	Q15014	288 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	EXT1	Q16394	746 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	MRGPRG-AS1	Q2M3A8	158 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	CEACAM20	Q6UY09	585 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	DCUN1D3	Q8IWE4	304 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	CLYBL	Q8N0X4	340 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	OR10V1	Q8NGI7	309 aa		4.54	□□□□□ -1.68
LSM5-209	ENST00000468872	SLC26A7	Q8TE54	656 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms