RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ALDOAP04075 364 aaKnown RBP3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 IGHV4-34P06331 123 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 CCDC166P0CW27 439 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 THEGLP0DJG4 465 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 FDXRP22570 491 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 HTR1BP28222 390 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 RPA3P35244 121 aaPredicted RBP3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 GNPDA1P46926 289 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 CCT5P48643 541 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 CCR5P51681 352 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 THOP1P52888 689 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 DCDC1P59894 354 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 RAB10P61026 200 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 CDK3Q00526 305 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 CREB5Q02930 508 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 HSPA14Q0VDF9 509 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 IL10RAQ13651 578 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 BOP1Q14137 746 aaKnown RBP3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 LPAL2Q16609 132 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 SYTL3Q4VX76 610 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 ACSBG2Q5FVE4 666 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 N4BP2L1Q5TBK1 243 aaPredicted RBP3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 HHATQ5VTY9 493 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 UGT3A1Q6NUS8 523 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TMEM207Q6UWW9 146 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 LAYNQ6UX15 382 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 SLC36A4Q6YBV0 504 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TIFABQ6ZNK6 161 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 Q6ZSN1 163 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 LPCAT2Q7L5N7 544 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 CHST15Q7LFX5 561 aaPredicted RBP3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 OTOAQ7RTW8 1153 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TBC1D1Q86TI0 1168 aaPredicted RBP3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 WDR5BQ86VZ2 330 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 LONP2Q86WA8 852 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TRIM69Q86WT6 500 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 CPNE9Q8IYJ1 553 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 MAML2Q8IZL2 1156 aaPredicted RBP3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 ZBTB2Q8N680 514 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 DDHD1Q8NEL9 900 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 FAM76AQ8TAV0 307 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TCP10LQ8TDR4 215 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 HEXDCQ8WVB3 486 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 EEF1AKMT1Q8WVE0 214 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 KCTD4Q8WVF5 259 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 ANKRD49Q8WVL7 239 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 DYDC1Q8WWB3 177 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 ASB12Q8WXK4 309 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 ST8SIA2Q92186 375 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 EXT2Q93063 718 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 FAM131CQ96AQ9 280 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 MIEF2Q96C03 454 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TLCD1Q96CP7 247 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 LINGO1Q96FE5 620 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 WWC2-AS2Q96NR7 200 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 BIRC8Q96P09 236 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 VPS35Q96QK1 796 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 PANX3Q96QZ0 392 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 GPR22Q99680 433 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 CCM2Q9BSQ5 444 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TSSK1BQ9BXA7 367 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TEX101Q9BY14 249 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 IQCGQ9H095 443 aaKnown RBP3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 P2RY12Q9H244 342 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 KCNH6Q9H252 994 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 LDAHQ9H6V9 325 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 SYTL2Q9HCH5 934 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 MED4Q9NPJ6 270 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TM7SF3Q9NS93 570 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 KLC4Q9NSK0 619 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 EURLQ9NYK6 297 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 NKIRAS1Q9NYS0 192 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TAS2R13Q9NYV9 303 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TMEM216Q9P0N5 145 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 SLC17A7Q9P2U7 560 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 DCDC2Q9UHG0 476 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 ST6GALNAC2Q9UJ37 374 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 PSMD13Q9UNM6 376 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 CLCA2Q9UQC9 943 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 DHRS7Q9Y394 339 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 PCDHB1Q9Y5F3 818 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 PCYT1BQ9Y5K3 369 aaPredicted RBP3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 HS3ST3A1Q9Y663 406 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 COMMD10Q9Y6G5 202 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 SLCO1B1Q9Y6L6 691 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 XIRP2A4UGR9 3374 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 ATXN2Q99700 1313 aaKnown RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CKAP5Q14008 2032 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 NUMA1Q14980 2115 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 IGLV3-16A0A075B6K0 115 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 TMEM120BA0PK00 339 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 NCF1BA6NI72 391 aaPredicted RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 A6NNZ2 444 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 AGAP14A8MT82 685 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 NCF1CA8MVU1 366 aaPredicted RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 PRR5-ARHGAP8B1AHC4 643 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CDC7O00311 574 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 KMOO15229 486 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 ZBTB14O43829 449 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms