RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 ERVK13-1Q9NX77 482 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 EIF2B4Q9UI10 523 aaKnown RBP17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 KLHL20Q9Y2M5 609 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 PCDHB9Q9Y5E1 797 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 KCNE2Q9Y6J6 123 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 UNC80Q8N2C7 3258 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 SERPINI2O75830 405 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 CD160O95971 181 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 C1RP00736 705 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 NPPAP01160 153 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 FGF4P08620 206 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 CR2P20023 1033 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 OGNP20774 298 aaKnown RBP17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 CA5AP35218 305 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 RFX2P48378 723 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 GZMKP49863 264 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 ARF5P84085 180 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 SYT16Q17RD7 645 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 ANKS6Q68DC2 871 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 TIGD3Q6B0B8 471 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 CARNMT1Q8N4J0 409 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 AADATQ8N5Z0 425 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 PAF1Q8N7H5 531 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 RHEBL1Q8TAI7 183 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 FRS2Q8WU20 508 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 EID2BQ96D98 161 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 LINGO1Q96FE5 620 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 SLC22A12Q96S37 553 aa17.52■□□□□ 0.39
SNAPC3-205ENST00000467062 PLD2O14939 933 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 RPLP0P05388 317 aaKnown RBP17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 UFM1P61960 85 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 PLD1Q13393 1074 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 HECTD3Q5T447 861 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 HDDC2Q7Z4H3 204 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 DEFB128Q7Z7B8 93 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 ADHFE1Q8IWW8 467 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 OR2T11Q8NH01 316 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 PYCR2Q96C36 320 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 TOE1Q96GM8 510 aaKnown RBP17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 IL20Q9NYY1 176 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 PRRC2BQ5JSZ5 2229 aaKnown RBP17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 LCHNA4D1U4 455 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 H3BUI4 141 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 TFECO14948 347 aaPredicted RBP17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 OR2B3O76000 313 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 TSPAN12O95859 305 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 LPOP22079 712 aaPredicted RBP17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 GADD45AP24522 165 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 LIPAP38571 399 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 TAF1AQ15573 450 aaPredicted RBP17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 PAGE3Q5JUK9 113 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 ANKRD34AQ69YU3 496 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 AFTPHQ6ULP2 937 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 ANKS3Q6ZW76 656 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 DTWD1Q8N5C7 304 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 OR4M1Q8NGD0 313 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 OR10Z1Q8NGY1 313 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 DERL2Q9GZP9 239 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 CD274Q9NZQ7 290 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 KLHL21Q9UJP4 597 aa17.51■□□□□ 0.39
SNAPC3-205ENST00000467062 CCDC182A6NF36 153 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 OR4F21O95013 312 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 F11P03951 625 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 RCAN2Q14206 197 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 ZNF599Q96NL3 588 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 TRNT1Q96Q11 434 aaKnown RBP17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 VN1R3Q9BXE9 311 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 SRRDQ9UH36 339 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 E5RI56 91 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 ICAM2P13598 275 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 PKMP14618 531 aaKnown RBP17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 HMGA1P17096 107 aaKnown RBP17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 PIK3CBP42338 1070 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 ETV1P50549 477 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 GRIK2Q13002 908 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 BTBD16Q32M84 506 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 ALG1LQ6GMV1 187 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 CXorf57Q6NSI4 855 aaKnown RBP17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 CLDN19Q8N6F1 224 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 WFDC5Q8TCV5 224 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 BEX2Q9BXY8 128 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 ZC4H2Q9NQZ6 224 aa17.5■□□□□ 0.39
SNAPC3-205ENST00000467062 LINC00862A6NCI5 91 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 ARVCFO00192 962 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 PQBP1O60828 265 aaKnown RBP17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 CLDN11O75508 207 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 ACADMP11310 421 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 ZNF30P17039 623 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 KEAP1Q14145 624 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 TAF12Q16514 161 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 NECAB2Q7Z6G3 386 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 HIPK1Q86Z02 1210 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 CD200R1Q8TD46 325 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 AUTS2Q8WXX7 1259 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 PRDM8Q9NQV8 689 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 SNX7Q9UNH6 387 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 ERVW-1Q9UQF0 538 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 ASPDHA6ND91 283 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 MOXD2PA6NHM9 499 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms