RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 GRHL2Q6ISB3 625 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 LETMD1Q6P1Q0 360 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 ATG14Q6ZNE5 492 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 ADCK2Q7Z695 626 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 MILR1Q7Z6M3 343 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 CUZD1Q86UP6 607 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 FAM129CQ86XR2 697 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 KMT5CQ86Y97 462 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 SLITRK4Q8IW52 837 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 C19orf47Q8N9M1 422 aaKnown RBP12.73□□□□□ -0.37
PDCD11-202ENST00000466959 OR4F6Q8NGB9 312 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 PRAP1Q96NZ9 151 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 CDK15Q96Q40 435 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 AIF1LQ9BQI0 150 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 PITHD1Q9GZP4 211 aaPredicted RBP12.73□□□□□ -0.37
PDCD11-202ENST00000466959 CHRNA10Q9GZZ6 450 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 CCDC134Q9H6E4 229 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 ZNF395Q9H8N7 513 aaPredicted RBP12.73□□□□□ -0.37
PDCD11-202ENST00000466959 MID1IP1Q9NPA3 183 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 THAP1Q9NVV9 213 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 KLHL3Q9UH77 587 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 TRPS1Q9UHF7 1281 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 ZNF225Q9UK10 706 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.73□□□□□ -0.37
PDCD11-202ENST00000466959 KLHL20Q9Y2M5 609 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 RNF11Q9Y3C5 154 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 ASPMQ8IZT6 3477 aa12.73□□□□□ -0.37
PDCD11-202ENST00000466959 GCN1Q92616 2671 aaKnown RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 IGHV5-10-1A0A0J9YXX1 117 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 A0A1B0GTL3 188 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 SPAARA0A1B0GVQ0 90 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 TRBC2A0A5B9 178 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 EIF4E1BA6NMX2 242 aaKnown RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 HAT1O14929 419 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 POLR3GO15318 223 aaPredicted RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 DKK1O94907 266 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 OR4F21O95013 312 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 ZBTB11O95625 1053 aaPredicted RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 FTH1P19P0C7X4 201 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 HGFP14210 728 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 JUPP14923 745 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 EZRP15311 586 aaKnown RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 CD22P20273 847 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 CXCR2P25025 360 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 MPSTP25325 297 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 GRK3P35626 688 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 GYS2P54840 703 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 INSM1Q01101 510 aaPredicted RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 OCRLQ01968 901 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 RELAQ04206 551 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 TRA2AQ13595 282 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 ZIC1Q15915 447 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 RBM44Q6ZP01 1051 aaKnown RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 ARHGAP22Q7Z5H3 698 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 MYLK4Q86YV6 388 aaPredicted RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 KRT78Q8N1N4 520 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 TBC1D19Q8N5T2 526 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 DCBLD1Q8N8Z6 715 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 KLHL6Q8WZ60 621 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 TCTN2Q96GX1 697 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 CCDC74BQ96LY2 380 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 SORT1Q99523 831 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 SARGQ9BW04 601 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 TMEM121BQ9BXQ6 578 aaPredicted RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 SLC29A3Q9BZD2 475 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 SHCBP1LQ9BZQ2 653 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 C20orf27Q9GZN8 174 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 KLHL25Q9H0H3 589 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 SPNS1Q9H2V7 528 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 ZNF768Q9H5H4 540 aaKnown RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 NT5DC2Q9H857 520 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 GEMIN8Q9NWZ8 242 aaKnown RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 HAO1Q9UJM8 370 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 APOBEC2Q9Y235 224 aaKnown RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 BTRCQ9Y297 605 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 RAP2CQ9Y3L5 183 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 NEUROG3Q9Y4Z2 214 aa12.72□□□□□ -0.37
PDCD11-202ENST00000466959 MDC1Q14676 2089 aaKnown RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 FLNBO75369 2602 aaKnown RBP12.72□□□□□ -0.37
PDCD11-202ENST00000466959 DSPP15924 2871 aaKnown RBP12.71□□□□□ -0.37
PDCD11-202ENST00000466959 NRP2O60462 931 aa12.71□□□□□ -0.37
PDCD11-202ENST00000466959 MLLT3P42568 568 aaPredicted RBP12.71□□□□□ -0.37
PDCD11-202ENST00000466959 RPS15AP62244 130 aaKnown RBP12.71□□□□□ -0.37
PDCD11-202ENST00000466959 SIM1P81133 766 aaPredicted RBP12.71□□□□□ -0.37
PDCD11-202ENST00000466959 MEF2AQ02078 507 aaPredicted RBP12.71□□□□□ -0.37
PDCD11-202ENST00000466959 ZFP36L1Q07352 338 aaKnown RBP12.71□□□□□ -0.37
PDCD11-202ENST00000466959 HIST2H2ACQ16777 129 aaPredicted RBP12.71□□□□□ -0.37
PDCD11-202ENST00000466959 CDCP2Q5VXM1 449 aa12.71□□□□□ -0.37
PDCD11-202ENST00000466959 TTC19Q6DKK2 380 aaPredicted RBP12.71□□□□□ -0.37
PDCD11-202ENST00000466959 HIST2H2AA3Q6FI13 130 aa12.71□□□□□ -0.37
PDCD11-202ENST00000466959 MED27Q6P2C8 311 aa12.71□□□□□ -0.37
PDCD11-202ENST00000466959 RNF44Q7L0R7 432 aa12.71□□□□□ -0.37
PDCD11-202ENST00000466959 MTERF4Q7Z6M4 381 aaKnown RBP12.71□□□□□ -0.37
PDCD11-202ENST00000466959 SLCO6A1Q86UG4 719 aa12.71□□□□□ -0.37
PDCD11-202ENST00000466959 KIRREL3Q8IZU9 778 aa12.71□□□□□ -0.37
PDCD11-202ENST00000466959 CDYL2Q8N8U2 506 aa12.71□□□□□ -0.37
PDCD11-202ENST00000466959 ZNF740Q8NDX6 193 aa12.71□□□□□ -0.37
PDCD11-202ENST00000466959 UBE2E3Q969T4 207 aa12.71□□□□□ -0.37
PDCD11-202ENST00000466959 SLC41A2Q96JW4 573 aa12.71□□□□□ -0.37
PDCD11-202ENST00000466959 C7orf26Q96N11 449 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms