RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 GSTM2P28161 218 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 ALDH3A1P30838 453 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 ETV5P41161 510 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 HNF4AP41235 474 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 SERPINB4P48594 390 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 GABREP78334 506 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 IRF8Q02556 426 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 CLCQ05315 142 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 FOXM1Q08050 763 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 CHIT1Q13231 466 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 DOC2AQ14183 400 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 GPR19Q15760 415 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.32■□□□□ 0.04
GPC1-207ENST00000466624 XKR6Q5GH73 641 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 PAGE2BQ5JRK9 111 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 TCTE1Q5JU00 501 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 PRAMEF9Q5VWM5 478 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 LIPJQ5W064 366 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 CEACAM20Q6UY09 585 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 PPP1R3BQ86XI6 285 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 MARCH9Q86YJ5 346 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 MCATQ8IVS2 390 aaKnown RBP15.32■□□□□ 0.04
GPC1-207ENST00000466624 C10orf107Q8IVU9 208 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 KRT78Q8N1N4 520 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 PPP4R1Q8TF05 950 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 N4BP2L2Q92802 583 aaPredicted RBP15.32■□□□□ 0.04
GPC1-207ENST00000466624 NXPE2Q96DL1 559 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 SEC16BQ96JE7 1060 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 OR2A5Q96R48 311 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 ASPSCR1Q9BZE9 553 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 GEMIN8Q9NWZ8 242 aaKnown RBP15.32■□□□□ 0.04
GPC1-207ENST00000466624 SLC39A1Q9NY26 324 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 PISDQ9UG56 409 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 SERTAD3Q9UJW9 196 aa15.32■□□□□ 0.04
GPC1-207ENST00000466624 A0A0J9YVX5 310 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 TMEM150CB9EJG8 249 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 H3BQF6 201 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 OR7A17O14581 309 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 HCRTR1O43613 425 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 MLYCDO95822 493 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 OTCP00480 354 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 VARSP26640 1264 aaKnown RBP15.31■□□□□ 0.04
GPC1-207ENST00000466624 AHRP35869 848 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 SCTRP47872 440 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 MAPK10P53779 464 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 ITGA1P56199 1179 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 DEFB110Q30KQ9 67 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 GGTA1PQ4G0N0 100 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 DCAF12Q5T6F0 453 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 TMEM164Q5U3C3 297 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 GRHL2Q6ISB3 625 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 FRMD7Q6ZUT3 714 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 L3MBTL4Q8NA19 623 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 MFSD9Q8NBP5 474 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 TTLQ8NG68 377 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 OR1L3Q8NH93 324 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 UBE2E3Q969T4 207 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 SLC46A1Q96NT5 459 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 NSUN5Q96P11 429 aaKnown RBP15.31■□□□□ 0.04
GPC1-207ENST00000466624 SELENOSQ9BQE4 189 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 GSTO2Q9H4Y5 243 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 NOL11Q9H8H0 719 aaKnown RBP15.31■□□□□ 0.04
GPC1-207ENST00000466624 ACTR8Q9H981 624 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 NKIRAS1Q9NYS0 192 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 PCDHGA7Q9Y5G6 932 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 PCDHGA4Q9Y5G9 962 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 SPTBP11277 2137 aa15.31■□□□□ 0.04
GPC1-207ENST00000466624 FEZF1A0PJY2 475 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 PMS2P1A4D2B8 440 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 FITM1A5D6W6 292 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 TXNDC9O14530 226 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 NVLO15381 856 aaKnown RBP15.3■□□□□ 0.04
GPC1-207ENST00000466624 TNFSF15O95150 251 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 CD22P20273 847 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 RBMS1P29558 406 aaKnown RBP15.3■□□□□ 0.04
GPC1-207ENST00000466624 SERPINB5P36952 375 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 BCL6P41182 706 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 CCNG1P51959 295 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 NAGLUP54802 743 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 LCP2Q13094 533 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 TRAF3Q13114 568 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 SLBPQ14493 270 aaKnown RBP eCLIP15.3■□□□□ 0.04
GPC1-207ENST00000466624 HIST2H2ACQ16777 129 aaPredicted RBP15.3■□□□□ 0.04
GPC1-207ENST00000466624 CFAP157Q5JU67 520 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 HIST2H2AA3Q6FI13 130 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 FRMPD2BQ6IN97 320 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 TLDC1Q6P9B6 456 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 TMIGD1Q6UXZ0 262 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 GPR135Q8IZ08 494 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 ZNF655Q8N720 491 aaPredicted RBP15.3■□□□□ 0.04
GPC1-207ENST00000466624 OR6Y1Q8NGX8 325 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 ATP6V1E2Q96A05 226 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 RERGQ96A58 199 aaPredicted RBP15.3■□□□□ 0.04
GPC1-207ENST00000466624 ZNF382Q96SR6 550 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 TRMOQ9BU70 441 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 MECRQ9BV79 373 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 GATA5Q9BWX5 397 aaPredicted RBP15.3■□□□□ 0.04
GPC1-207ENST00000466624 SPNS1Q9H2V7 528 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 APMAPQ9HDC9 416 aa15.3■□□□□ 0.04
GPC1-207ENST00000466624 MED4Q9NPJ6 270 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms