RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 FAM60AQ9NP50 221 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 MID1IP1Q9NPA3 183 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 SLCO1B3Q9NPD5 702 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 THAP1Q9NVV9 213 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 KLHL3Q9UH77 587 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 ZNF490Q9ULM2 529 aaPredicted RBP10.69□□□□□ -0.7
VCP-204ENST00000466100 SEC16AO15027 2179 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 TRBC2A0A5B9 178 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 TMEM233B4DJY2 109 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 H0YIV9 168 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 RASSF9O75901 435 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 SNUPNO95149 360 aaKnown RBP10.68□□□□□ -0.7
VCP-204ENST00000466100 ZBTB11O95625 1053 aaPredicted RBP10.68□□□□□ -0.7
VCP-204ENST00000466100 HSPA4LO95757 839 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 FGF4P08620 206 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 CDK4P11802 303 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 EZRP15311 586 aaKnown RBP10.68□□□□□ -0.7
VCP-204ENST00000466100 NELFEP18615 380 aaKnown RBP10.68□□□□□ -0.7
VCP-204ENST00000466100 CCKBRP32239 447 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 BCL6P41182 706 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 SCTRP47872 440 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 PPM1FP49593 454 aaPredicted RBP10.68□□□□□ -0.7
VCP-204ENST00000466100 TRA2AQ13595 282 aaKnown RBP eCLIP10.68□□□□□ -0.7
VCP-204ENST00000466100 UGT3A2Q3SY77 523 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 TCHHL1Q5QJ38 904 aaPredicted RBP10.68□□□□□ -0.7
VCP-204ENST00000466100 KANK2Q63ZY3 851 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 ADNP2Q6IQ32 1131 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 FBXO42Q6P3S6 717 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 RBM44Q6ZP01 1051 aaKnown RBP10.68□□□□□ -0.7
VCP-204ENST00000466100 VN1R5Q7Z5H4 357 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 VN1R4Q7Z5H5 301 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 MILR1Q7Z6M3 343 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 KMT5CQ86Y97 462 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 PLD3Q8IV08 490 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 D2HGDHQ8N465 521 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 DNAJC22Q8N4W6 341 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 ZNF781Q8N8C0 355 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 ANKRD53Q8N9V6 530 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 WDR20Q8TBZ3 569 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 MAGEB10Q96LZ2 347 aaPredicted RBP10.68□□□□□ -0.7
VCP-204ENST00000466100 C7orf26Q96N11 449 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 ZNF285Q96NJ3 590 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 OR2A5Q96R48 311 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 AIF1LQ9BQI0 150 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 SLC29A3Q9BZD2 475 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 SHCBP1LQ9BZQ2 653 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 PITHD1Q9GZP4 211 aaPredicted RBP10.68□□□□□ -0.7
VCP-204ENST00000466100 ZMYND15Q9H091 742 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 NT5DC2Q9H857 520 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 EML4Q9HC35 981 aaKnown RBP10.68□□□□□ -0.7
VCP-204ENST00000466100 ENAMQ9NRM1 1142 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 SIDT1Q9NXL6 827 aaKnown RBP10.68□□□□□ -0.7
VCP-204ENST00000466100 ZDHHC2Q9UIJ5 367 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 CDV3Q9UKY7 258 aaKnown RBP10.68□□□□□ -0.7
VCP-204ENST00000466100 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.68□□□□□ -0.7
VCP-204ENST00000466100 RAP2CQ9Y3L5 183 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 TSC22D4Q9Y3Q8 395 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 PCDHGA4Q9Y5G9 962 aa10.68□□□□□ -0.7
VCP-204ENST00000466100 FEZF1A0PJY2 475 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 TCP11X1B4DZS4 312 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 H3BMH7 237 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 AZIN1O14977 448 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 POLR3GO15318 223 aaPredicted RBP10.67□□□□□ -0.7
VCP-204ENST00000466100 LCMT2O60294 686 aaKnown RBP10.67□□□□□ -0.7
VCP-204ENST00000466100 EDF1O60869 148 aaKnown RBP10.67□□□□□ -0.7
VCP-204ENST00000466100 KCNK5O95279 499 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 TBX6O95947 436 aaPredicted RBP10.67□□□□□ -0.7
VCP-204ENST00000466100 CAPN1P07384 714 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 MSL3P1P0C860 447 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 HGFP14210 728 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 PLA2G5P39877 138 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 HTR6P50406 440 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 NOVA1P51513 510 aaKnown RBP10.67□□□□□ -0.7
VCP-204ENST00000466100 CLDN6P56747 220 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 RPS15AP62244 130 aaKnown RBP10.67□□□□□ -0.7
VCP-204ENST00000466100 HSD11B2P80365 405 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 SIM1P81133 766 aaPredicted RBP10.67□□□□□ -0.7
VCP-204ENST00000466100 LAPTM5Q13571 262 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 C16orf72Q14CZ0 275 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 ZRSR2Q15696 482 aaKnown RBP10.67□□□□□ -0.7
VCP-204ENST00000466100 CPSF6Q16630 551 aaKnown RBP eCLIP10.67□□□□□ -0.7
VCP-204ENST00000466100 RSPO4Q2I0M5 234 aaPredicted RBP10.67□□□□□ -0.7
VCP-204ENST00000466100 PAGE2BQ5JRK9 111 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 SNAP47Q5SQN1 464 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 SH2D4BQ5SQS7 431 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 TTC19Q6DKK2 380 aaPredicted RBP10.67□□□□□ -0.7
VCP-204ENST00000466100 CLEC6AQ6EIG7 209 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 DHRS13Q6UX07 377 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 TMIGD1Q6UXZ0 262 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 RNF165Q6ZSG1 346 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 ADCK2Q7Z695 626 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.67□□□□□ -0.7
VCP-204ENST00000466100 CHCHD4Q8N4Q1 142 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 CDYL2Q8N8U2 506 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 MFSD9Q8NBP5 474 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 RCBTB1Q8NDN9 531 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 OR7G3Q8NG95 312 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 USP7Q93009 1102 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 ATP6V1E2Q96A05 226 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 TCTN2Q96GX1 697 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms