RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 NEIL2Q969S2 332 aa8.49□□□□□ -1.05
UBA3-208ENST00000465627 ERP27Q96DN0 273 aa8.49□□□□□ -1.05
UBA3-208ENST00000465627 PTCD3Q96EY7 689 aaKnown RBP8.49□□□□□ -1.05
UBA3-208ENST00000465627 C11orf24Q96F05 449 aaPredicted RBP8.49□□□□□ -1.05
UBA3-208ENST00000465627 FERD3LQ96RJ6 166 aa8.49□□□□□ -1.05
UBA3-208ENST00000465627 GSDMCQ9BYG8 508 aa8.49□□□□□ -1.05
UBA3-208ENST00000465627 SPNS1Q9H2V7 528 aa8.49□□□□□ -1.05
UBA3-208ENST00000465627 SLC40A1Q9NP59 571 aa8.49□□□□□ -1.05
UBA3-208ENST00000465627 CCDC177Q9NQR7 707 aaPredicted RBP8.49□□□□□ -1.05
UBA3-208ENST00000465627 FARSBQ9NSD9 589 aaKnown RBP8.49□□□□□ -1.05
UBA3-208ENST00000465627 TMEM74BQ9NUR3 256 aa8.49□□□□□ -1.05
UBA3-208ENST00000465627 IMP3Q9NV31 184 aaKnown RBP8.49□□□□□ -1.05
UBA3-208ENST00000465627 PILRBQ9UKJ0 227 aa8.49□□□□□ -1.05
UBA3-208ENST00000465627 SLC12A4Q9UP95 1085 aa8.49□□□□□ -1.05
UBA3-208ENST00000465627 BTRCQ9Y297 605 aa8.49□□□□□ -1.05
UBA3-208ENST00000465627 TSC22D4Q9Y3Q8 395 aa8.49□□□□□ -1.05
UBA3-208ENST00000465627 COL5A1P20908 1838 aaPredicted RBP8.49□□□□□ -1.05
UBA3-208ENST00000465627 LRBAP50851 2863 aa8.49□□□□□ -1.05
UBA3-208ENST00000465627 ATP6AP2A0A1C7CYW4 349 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 ERICH4A6NGS2 130 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 LSM1O15116 133 aaKnown RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 CCDC22O60826 627 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 ATP6AP2O75787 350 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 TBX6O95947 436 aaPredicted RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 ZNF806P0C7X5 589 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 LINC00032P0C843 101 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 GNAZP19086 355 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 NDUFS1P28331 727 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 ADSLP30566 484 aaPredicted RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 HNF4AP41235 474 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 HALP42357 657 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 RXRGP48443 463 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 CSNK1EP49674 416 aaKnown RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 AFF3P51826 1226 aaKnown RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 CHIT1Q13231 466 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 KIAA0040Q15053 153 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 TCEAL6Q6IPX3 200 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 OGFOD3Q6PK18 319 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 LAS2Q8IYD9 372 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 SYTL1Q8IYJ3 562 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 ADGRF3Q8IZF5 1079 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 SDR16C5Q8N3Y7 309 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 AFAP1L2Q8N4X5 818 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 SNX31Q8N9S9 440 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 SLC37A2Q8TED4 501 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 SMPDL3AQ92484 453 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 TCEAL3Q969E4 200 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 FCRL1Q96LA6 429 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 PPP1R36Q96LQ0 422 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 MAGEB10Q96LZ2 347 aaPredicted RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 MIPEPQ99797 713 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 RAB11FIP5Q9BXF6 653 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 ACTR8Q9H981 624 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 ARL8BQ9NVJ2 186 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 GEMIN8Q9NWZ8 242 aaKnown RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 GIMAP2Q9UG22 337 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 APOBEC3BQ9UH17 382 aaKnown RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 ZNF490Q9ULM2 529 aaPredicted RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 TDRKHQ9Y2W6 561 aaKnown RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 FIS1Q9Y3D6 152 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 ANGPTL3Q9Y5C1 460 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 KCNE2Q9Y6J6 123 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 LRRK2Q5S007 2527 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 PI4KAP42356 2102 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 KIR2DS5A0A0G2JLQ3 304 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 A0A0G2JNG1 304 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 PABPN1LA6NDY0 278 aaKnown RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 OR5K4A6NMS3 321 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 ENO4A6NNW6 628 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 C4orf47A7E2U8 309 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 E9PBE3 544 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 LMO7DNF2Z398 122 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 KIR2DS3K7RE56 304 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 ANKRD28O15084 1053 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 SLC22A2O15244 555 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 NOBOXO60393 691 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 KLHL41O60662 606 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 VPS4BO75351 444 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 PDYNP01213 254 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 C1GALT1C1LP0DN25 315 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 VARSP26640 1264 aaKnown RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 PSMB5P28074 263 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 ZFP36L2P47974 494 aaKnown RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 FASLGP48023 281 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 ATP4BP51164 291 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 HNRNPH2P55795 449 aaKnown RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 IRF8Q02556 426 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 DMTNQ08495 405 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 KLF10Q13118 480 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 C1orf61Q13536 156 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 UBAP2LQ14157 1087 aaKnown RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 KIR2DS5Q14953 304 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 NAA25Q14CX7 972 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 TCEA2Q15560 299 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 ZRSR2Q15696 482 aaKnown RBP8.48□□□□□ -1.05
UBA3-208ENST00000465627 SMU1Q2TAY7 513 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 PRRT3Q5FWE3 981 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 C6orf136Q5SQH8 315 aa8.48□□□□□ -1.05
UBA3-208ENST00000465627 PRAMEF14Q5SWL7 426 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms