RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ZNF891A8MT65 544 aaPredicted RBP16.88■□□□□ 0.29
VPS52-214ENST00000463486 NCF1CA8MVU1 366 aaPredicted RBP16.88■□□□□ 0.29
VPS52-214ENST00000463486 DSCR3O14972 297 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 PRAMEF4O60810 478 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 RFPL1O75677 317 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 KLHL2O95198 593 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 NCF1P14598 390 aaPredicted RBP16.88■□□□□ 0.29
VPS52-214ENST00000463486 TYK2P29597 1187 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 BCL6P41182 706 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 ARSFP54793 590 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 EMP3P54852 163 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 RPS18P62269 152 aaKnown RBP16.88■□□□□ 0.29
VPS52-214ENST00000463486 DCDP81605 110 aaKnown RBP16.88■□□□□ 0.29
VPS52-214ENST00000463486 HKDC1Q2TB90 917 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 NKAIN1Q4KMZ8 207 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 ATP1A1-AS1Q5TC04 95 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 FAM69BQ5VUD6 431 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 PRAMEF9Q5VWM5 478 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 MRPL14Q6P1L8 145 aaKnown RBP16.88■□□□□ 0.29
VPS52-214ENST00000463486 ZNF740Q8NDX6 193 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 RHEBL1Q8TAI7 183 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 STAG3L4Q8TBR4 150 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 BBC3Q96PG8 261 aaPredicted RBP16.88■□□□□ 0.29
VPS52-214ENST00000463486 EGFL8Q99944 293 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 ACTL8Q9H568 366 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 ZNF358Q9NW07 568 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 RUVBL1Q9Y265 456 aaKnown RBP16.88■□□□□ 0.29
VPS52-214ENST00000463486 BOD1L1Q8NFC6 3051 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 BSNQ9UPA5 3926 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 A0A1B0GX78 115 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 PABPN1LA6NDY0 278 aaKnown RBP16.87■□□□□ 0.29
VPS52-214ENST00000463486 TRIM49D1C9J1S8 452 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 KERAO60938 352 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 CREG1O75629 220 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 KRT38O76015 456 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 EIF2S1P05198 315 aaKnown RBP16.87■□□□□ 0.29
VPS52-214ENST00000463486 EPORP19235 508 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 CNTFP26441 200 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 ACAP2Q15057 778 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 FAM214AQ32MH5 1076 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 LINC00303Q3SY05 128 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 FBXO48Q5FWF7 155 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 SULT1C3Q6IMI6 304 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 TIFABQ6ZNK6 161 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 FRA10AC1Q70Z53 315 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 COX15Q7KZN9 410 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 ADCK2Q7Z695 626 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 CSNK1A1LQ8N752 337 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 ENDOVQ8N8Q3 282 aaKnown RBP16.87■□□□□ 0.29
VPS52-214ENST00000463486 ZSCAN1Q8NBB4 408 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 MZB1Q8WU39 189 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.87■□□□□ 0.29
VPS52-214ENST00000463486 SLC5A11Q8WWX8 675 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 ESAMQ96AP7 390 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 TLK1Q9UKI8 766 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 RNF112Q9ULX5 631 aa16.87■□□□□ 0.29
VPS52-214ENST00000463486 CCDC189A1A4V9 331 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 UBXN8O00124 270 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 MAP2K7O14733 419 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 FOXS1O43638 330 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 KLK8O60259 260 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 KATNA1O75449 491 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 SHBGP04278 402 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 SNRPAP09012 282 aaKnown RBP16.86■□□□□ 0.29
VPS52-214ENST00000463486 ALAS2P22557 587 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 CCR8P51685 355 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 RPS15AP62244 130 aaKnown RBP16.86■□□□□ 0.29
VPS52-214ENST00000463486 MEF2AQ02078 507 aaPredicted RBP16.86■□□□□ 0.29
VPS52-214ENST00000463486 CDC20Q12834 499 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 NCF4Q15080 339 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 TBR1Q16650 682 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 FAM83EQ2M2I3 478 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 WDR93Q6P2C0 686 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 NXPE4Q6UWF7 544 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 SLCO4C1Q6ZQN7 724 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 TCAIMQ8N3R3 496 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 TMEM151AQ8N4L1 468 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 MFSD9Q8NBP5 474 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 ADAMTS17Q8TE56 1095 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 THAP11Q96EK4 314 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 TSNARE1Q96NA8 513 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 SLC7A5P2Q9GIP4 190 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 IRAK4Q9NWZ3 460 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 TCFL5Q9UL49 500 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 MRPS2Q9Y399 296 aaKnown RBP16.86■□□□□ 0.29
VPS52-214ENST00000463486 IKBKGQ9Y6K9 419 aa16.86■□□□□ 0.29
VPS52-214ENST00000463486 STATHP02808 62 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 ITGB2P05107 769 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 AGXTP21549 392 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 VARSP26640 1264 aaKnown RBP16.85■□□□□ 0.29
VPS52-214ENST00000463486 GLRBP48167 497 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 HSPA7P48741 367 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 FOXL2P58012 376 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 RPS15P62841 145 aaKnown RBP16.85■□□□□ 0.29
VPS52-214ENST00000463486 RHDQ02161 417 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 IL10RAQ13651 578 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 SLC9A5Q14940 896 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 TAF1BQ53T94 588 aaPredicted RBP16.85■□□□□ 0.29
VPS52-214ENST00000463486 GARNL3Q5VVW2 1013 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 TTC29Q8NA56 475 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms