RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 MALRD1Q5VYJ5 2156 aa12.45□□□□□ -0.42
C9orf3-211ENST00000463372 HEATR5BQ9P2D3 2071 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 SCN3AQ9NY46 2000 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 TARM1B6A8C7 271 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 F8VZ95 297 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 GAPDHSO14556 408 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-211ENST00000463372 TMCC2O75069 709 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 S1PR4O95977 384 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 CEACAM8P31997 349 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-211ENST00000463372 IDUAP35475 653 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 EMP3P54852 163 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 GALNT2Q10471 571 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 SIX1Q15475 284 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-211ENST00000463372 SFT2D3Q587I9 215 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 CCDC122Q5T0U0 273 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 MON1BQ7L1V2 547 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 ABHD13Q7L211 337 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 TAX1BP1Q86VP1 789 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.44□□□□□ -0.42
C9orf3-211ENST00000463372 FBXW8Q8N3Y1 598 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 C2orf73Q8N5S3 287 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-211ENST00000463372 OR5K2Q8NHB8 316 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 SLC22A8Q8TCC7 542 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 FAF2Q96CS3 445 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 SPATA13Q96N96 652 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 RBM24Q9BX46 236 aaKnown RBP12.44□□□□□ -0.42
C9orf3-211ENST00000463372 EPB41L4BQ9H329 900 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 ARMCX1Q9P291 453 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 NFS1Q9Y697 457 aa12.44□□□□□ -0.42
C9orf3-211ENST00000463372 CFAP99D6REC4 459 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 GFPT2O94808 682 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 ALX3O95076 343 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 AP2A1O95782 977 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 NDST3O95803 873 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 F13A1P00488 732 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 ATP1A3P13637 1013 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 RBMXP38159 391 aaKnown RBP12.43□□□□□ -0.42
C9orf3-211ENST00000463372 ZNF136P52737 540 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 MAT1AQ00266 395 aaKnown RBP12.43□□□□□ -0.42
C9orf3-211ENST00000463372 CLEC16AQ2KHT3 1053 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 NDUFAF5Q5TEU4 345 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 MDGA2Q7Z553 956 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 PLD6Q8N2A8 252 aaKnown RBP12.43□□□□□ -0.42
C9orf3-211ENST00000463372 FAM109AQ8N4B1 249 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 TMEM156Q8N614 296 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 HSPH1Q92598 858 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 CAPZA3Q96KX2 299 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 TSGA13Q96PP4 275 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 PCDHB18PQ96TA0 734 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 TTTY12Q9BZ98 90 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 GOLPH3LQ9H4A5 285 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 DRG1Q9Y295 367 aaKnown RBP12.43□□□□□ -0.42
C9orf3-211ENST00000463372 PCDHA3Q9Y5H8 950 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 RYR3Q15413 4870 aa12.43□□□□□ -0.42
C9orf3-211ENST00000463372 A0A0A6YYC8 382 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-211ENST00000463372 I3L1I5 382 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-211ENST00000463372 MFSD11O43934 449 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 MATN4O95460 622 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 ATP1B2P14415 290 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-211ENST00000463372 PKLRP30613 574 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 TIMP3P35625 211 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 MAGEA5P43359 124 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 CPA2P48052 419 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 AGFG1P52594 562 aaKnown RBP12.42□□□□□ -0.42
C9orf3-211ENST00000463372 SLC26A5P58743 744 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 USP10Q14694 798 aaKnown RBP12.42□□□□□ -0.42
C9orf3-211ENST00000463372 PRTGQ2VWP7 1150 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 KLHDC7AQ5VTJ3 777 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 KIF2BQ8N4N8 673 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 ELP5Q8TE02 316 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 STK33Q9BYT3 514 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 DRC3Q9H069 523 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 ESRP2Q9H6T0 727 aaKnown RBP12.42□□□□□ -0.42
C9orf3-211ENST00000463372 DEPPQ9NTK1 212 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.42□□□□□ -0.42
C9orf3-211ENST00000463372 PSD3Q9NYI0 1048 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 PCDHGB3Q9Y5G1 929 aa12.42□□□□□ -0.42
C9orf3-211ENST00000463372 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.42□□□□□ -0.42
C9orf3-211ENST00000463372 PINLYPA6NC86 204 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 ARHGEF33A8MVX0 844 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 DEFB108AA8MXU0 73 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 SIAH2O43255 324 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 CTIFO43310 598 aaKnown RBP12.41□□□□□ -0.42
C9orf3-211ENST00000463372 BUD23O43709 281 aaKnown RBP12.41□□□□□ -0.42
C9orf3-211ENST00000463372 FKBP9O95302 570 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 ZSCAN22P10073 491 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-211ENST00000463372 OPRM1P35372 400 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 CASP9P55211 416 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 PTK6Q13882 451 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 PRR31Q5SQ13 230 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 LRRC8BQ6P9F7 803 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 GLT6D1Q7Z4J2 308 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 LACC1Q8IV20 430 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-211ENST00000463372 LINC01555Q8NAE3 123 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 PSD4Q8NDX1 1056 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 OR2M7Q8NG81 312 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 LRRN4Q8WUT4 740 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 IGFBPL1Q8WX77 278 aa12.41□□□□□ -0.42
C9orf3-211ENST00000463372 L2HGDHQ9H9P8 463 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms