RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 SCML4Q8N228 414 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 STK40Q8N2I9 435 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 TMEM217Q8N7C4 229 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 TMEM174Q8WUU8 243 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 DDB2Q92466 427 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 AZIN2Q96A70 460 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 RNF125Q96EQ8 232 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 TMA16Q96EY4 203 aaKnown RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 APOPT1Q96IL0 206 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 EPSTI1Q96J88 318 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 OMDQ99983 421 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 DUSP16Q9BY84 665 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 UBXN6Q9BZV1 441 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 B3GNT4Q9C0J1 378 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 PAIP1Q9H074 479 aaKnown RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 SPAG4Q9NPE6 437 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 AGPAT3Q9NRZ7 376 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 FAM49BQ9NUQ9 324 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 SLCO3A1Q9UIG8 710 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 UTS2RQ9UKP6 389 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 SARDHQ9UL12 918 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 ICKQ9UPZ9 632 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 ERVW-1Q9UQF0 538 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 HBS1LQ9Y450 684 aaKnown RBP4.77□□□□□ -1.65
COPS3-204ENST00000462236 ABCA4P78363 2273 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 DNHD1Q96M86 4753 aa4.77□□□□□ -1.65
COPS3-204ENST00000462236 UBE4BO95155 1302 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 TRBV5-7A0A0A0MS05 114 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 NEMP2A6NFY4 417 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 LRRIQ3A6PVS8 624 aaPredicted RBP4.76□□□□□ -1.65
COPS3-204ENST00000462236 STX6O43752 255 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 RTN2O75298 545 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 NEBLO76041 1014 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 TMCC1O94876 653 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 BMP15O95972 392 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 CSF2P04141 144 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 RNF224P0DH78 156 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 ALPPL2P10696 532 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 ADORA2BP29275 332 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 MAT2AP31153 395 aaKnown RBP4.76□□□□□ -1.65
COPS3-204ENST00000462236 CCKBRP32239 447 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 PSMD8P48556 350 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 NR1H2P55055 460 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 HNRNPKP61978 463 aaKnown RBP eCLIP4.76□□□□□ -1.65
COPS3-204ENST00000462236 SNRPFP62306 86 aaKnown RBP4.76□□□□□ -1.65
COPS3-204ENST00000462236 RPP30P78346 268 aaKnown RBP4.76□□□□□ -1.65
COPS3-204ENST00000462236 MPP1Q00013 466 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 EIF3IQ13347 325 aaKnown RBP4.76□□□□□ -1.65
COPS3-204ENST00000462236 FZD2Q14332 565 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 ELAVL3Q14576 367 aaKnown RBP4.76□□□□□ -1.65
COPS3-204ENST00000462236 PCM1Q15154 2024 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 TWIST1Q15672 202 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 ZNF284Q2VY69 593 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 ZNF699Q32M78 642 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 SETMARQ53H47 684 aaPredicted RBP4.76□□□□□ -1.65
COPS3-204ENST00000462236 FSCBQ5H9T9 825 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 MTX3Q5HYI7 312 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 C1orf220Q5T0J3 134 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 PIP5KL1Q5T9C9 394 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 ACAD10Q6JQN1 1059 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 NEK5Q6P3R8 708 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 RFWD3Q6PCD5 774 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 SCARA5Q6ZMJ2 495 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 EFL1Q7Z2Z2 1120 aaKnown RBP4.76□□□□□ -1.65
COPS3-204ENST00000462236 SLC25A41Q8N5S1 370 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 ZNF557Q8N988 423 aaPredicted RBP4.76□□□□□ -1.65
COPS3-204ENST00000462236 XXYLT1Q8NBI6 393 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 ZNF548Q8NEK5 533 aaPredicted RBP4.76□□□□□ -1.65
COPS3-204ENST00000462236 SPATA20Q8TB22 786 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 GANCQ8TET4 914 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 TMEM170AQ8WVE7 144 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 HSPH1Q92598 858 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 BMFQ96LC9 184 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 PRICKLE1Q96MT3 831 aaPredicted RBP4.76□□□□□ -1.65
COPS3-204ENST00000462236 ZNF304Q9HCX3 659 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 PNRC2Q9NPJ4 139 aaKnown RBP4.76□□□□□ -1.65
COPS3-204ENST00000462236 OLA1Q9NTK5 396 aaKnown RBP4.76□□□□□ -1.65
COPS3-204ENST00000462236 TMEM184CQ9NVA4 438 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 DMAC2Q9NW81 257 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 NCKIPSDQ9NZQ3 722 aa4.76□□□□□ -1.65
COPS3-204ENST00000462236 FBN3Q75N90 2809 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 SPTY2D1-AS1A0A0U1RR47 76 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 GOLGA6L7A0A1B0GV03 622 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 A0A1W2PQM1 296 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 F5H0A9 414 aaPredicted RBP4.75□□□□□ -1.65
COPS3-204ENST00000462236 ALOX15BO15296 676 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 ACSL4O60488 711 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 TBL1XO60907 577 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 F9P00740 461 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 CENPBP07199 599 aaPredicted RBP4.75□□□□□ -1.65
COPS3-204ENST00000462236 PAFAH1B1P43034 410 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 MMP13P45452 471 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 CASP4P49662 377 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 PLK1P53350 603 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 AP3M2P53677 418 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 CDH15P55291 814 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 ST8SIA6P61647 398 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 YWHAGP61981 247 aaKnown RBP eCLIP4.75□□□□□ -1.65
COPS3-204ENST00000462236 ECT2LQ008S8 904 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 ZFP36L1Q07352 338 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms