RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 PCDH17O14917 1159 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 C8GP07360 202 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 FDXRP22570 491 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 TSFMP43897 325 aaKnown RBP16.8■□□□□ 0.28
COL1A2-202ENST00000461525 AVPR1BP47901 424 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 EEF1A2Q05639 463 aaKnown RBP16.8■□□□□ 0.28
COL1A2-202ENST00000461525 SP140Q13342 867 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 FAM53BQ14153 422 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 SPANXN3Q5MJ09 141 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 B3GNTL1Q67FW5 361 aaPredicted RBP16.8■□□□□ 0.28
COL1A2-202ENST00000461525 FAAH2Q6GMR7 532 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 PCGF5Q86SE9 256 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 MYO1HQ8N1T3 1032 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 EEF1AKMT1Q8WVE0 214 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 CCDC138Q96M89 665 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 LMF1Q96S06 567 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 BARD1Q99728 777 aaKnown RBP16.8■□□□□ 0.28
COL1A2-202ENST00000461525 NAT9Q9BTE0 207 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 TGIF2Q9GZN2 237 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 PCBD2Q9H0N5 130 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 DDX47Q9H0S4 455 aaKnown RBP16.8■□□□□ 0.28
COL1A2-202ENST00000461525 TMEM184CQ9NVA4 438 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 RIC8BQ9NVN3 520 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 PDE10AQ9Y233 779 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 ANKRD12Q6UB98 2062 aa16.8■□□□□ 0.28
COL1A2-202ENST00000461525 PCM1Q15154 2024 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 A0A1W2PQ72 361 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 BANF1O75531 89 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 KLHL18O94889 574 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 STATHP02808 62 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 SERPINA7P05543 415 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 UQCRHP07919 91 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 PRR35P0CG20 571 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 RPS15AP62244 130 aaKnown RBP16.79■□□□□ 0.28
COL1A2-202ENST00000461525 MAT1AQ00266 395 aaKnown RBP16.79■□□□□ 0.28
COL1A2-202ENST00000461525 CDC16Q13042 620 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 SYT16Q17RD7 645 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 BBS9Q3SYG4 887 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 C4orf17Q53FE4 359 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 KIAA0408Q6ZU52 694 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 ZC3H7AQ8IWR0 971 aaKnown RBP16.79■□□□□ 0.28
COL1A2-202ENST00000461525 LINGO1Q96FE5 620 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 PARVBQ9HBI1 364 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 TRMT1Q9NXH9 659 aaKnown RBP16.79■□□□□ 0.28
COL1A2-202ENST00000461525 ADAMTS6Q9UKP5 1117 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 MRPS2Q9Y399 296 aaKnown RBP16.79■□□□□ 0.28
COL1A2-202ENST00000461525 CCDC88CQ9P219 2028 aa16.79■□□□□ 0.28
COL1A2-202ENST00000461525 IGHV1-45A0A0A0MS14 117 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 A1L4Q6 167 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 SLC16A5O15375 505 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 TCP1P17987 556 aaKnown RBP16.78■□□□□ 0.28
COL1A2-202ENST00000461525 GABRB3P28472 473 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 CDKN2DP55273 166 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 TIAL1Q01085 375 aaKnown RBP eCLIP16.78■□□□□ 0.28
COL1A2-202ENST00000461525 MSS51Q4VC12 460 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 RBM20Q5T481 1227 aaKnown RBP16.78■□□□□ 0.28
COL1A2-202ENST00000461525 HIST2H2BCQ6DN03 193 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 AGTRAPQ6RW13 159 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 PAQR3Q6TCH7 311 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 MBOAT1Q6ZNC8 495 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 VN1R4Q7Z5H5 301 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 C17orf64Q86WR6 236 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 CNTN4Q8IWV2 1026 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 OR9A4Q8NGU2 314 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 BRIX1Q8TDN6 353 aaKnown RBP16.78■□□□□ 0.28
COL1A2-202ENST00000461525 GRHL3Q8TE85 626 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 SLCO2A1Q92959 643 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 ALKBH8Q96BT7 664 aaKnown RBP16.78■□□□□ 0.28
COL1A2-202ENST00000461525 THAP11Q96EK4 314 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 CERS2Q96G23 380 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 ATG10Q9H0Y0 220 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 PTGFRNQ9P2B2 879 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 ERRFI1Q9UJM3 462 aaPredicted RBP16.78■□□□□ 0.28
COL1A2-202ENST00000461525 MKL2Q9ULH7 1088 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 SLC5A6Q9Y289 635 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 ICE1Q9Y2F5 2266 aa16.78■□□□□ 0.28
COL1A2-202ENST00000461525 KCNE1BA0A087WTH5 132 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 DYTNA2CJ06 578 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 PABPN1LA6NDY0 278 aaKnown RBP16.77■□□□□ 0.28
COL1A2-202ENST00000461525 H0YIG0 161 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 BMP10O95393 424 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 HIST1H2AGP0C0S8 130 aaPredicted RBP16.77■□□□□ 0.28
COL1A2-202ENST00000461525 HIST1H2ADP20671 130 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 CCND1P24385 295 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 SOX11P35716 441 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 CSNK1G2P78368 415 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 ARG2P78540 354 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 NAE1Q13564 534 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 RIPOR1Q6ZS17 1223 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 PDIK1LQ8N165 341 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 SIRT6Q8N6T7 355 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 ST6GALNAC3Q8NDV1 305 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 HIST1H2AHQ96KK5 128 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 C5orf34Q96MH7 638 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 HIST1H2AJQ99878 128 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 H2AFJQ9BTM1 129 aa16.77■□□□□ 0.28
COL1A2-202ENST00000461525 PPANQ9NQ55 473 aaKnown RBP16.77■□□□□ 0.28
COL1A2-202ENST00000461525 NOTCH2Q04721 2471 aa16.76■□□□□ 0.27
COL1A2-202ENST00000461525 DOPEY1Q5JWR5 2465 aa16.76■□□□□ 0.27
COL1A2-202ENST00000461525 HIVEP3Q5T1R4 2406 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms