RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 MAPRE2Q15555 327 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 SMAD1Q15797 465 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 TMEM196Q5HYL7 178 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 C10orf76Q5T2E6 689 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 OR52E8Q6IFG1 317 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 ANO7Q6IWH7 933 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 C8orf74Q6P047 294 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 FBXO42Q6P3S6 717 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 CLEC9AQ6UXN8 241 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 LINGO4Q6UY18 593 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 BBS12Q6ZW61 710 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 CHST9Q7L1S5 443 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 SYT13Q7L8C5 426 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 STRADAQ7RTN6 431 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 SLFN11Q7Z7L1 901 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 NLRP14Q86W24 1093 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 UNC45BQ8IWX7 931 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM217AQ8IXS0 508 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 UBALD2Q8IYN6 164 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 ADGRG5Q8IZF4 528 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 FSTL5Q8N475 847 aaPredicted RBP4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 ALLCQ8N6M5 410 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 NPWQ8N729 165 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 FRMD1Q8N878 549 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 C11orf44Q8N8P7 122 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 ATP6V0D2Q8N8Y2 350 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 CCDC63Q8NA47 563 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 TNIP2Q8NFZ5 429 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 HMGB4Q8WW32 186 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 ATL1Q8WXF7 558 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 RFFLQ8WZ73 363 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 SNX19Q92543 992 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 CD101Q93033 1021 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 ATP2A3Q93084 1043 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 CFAP36Q96G28 342 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 VPS50Q96JG6 964 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 BTN2A3PQ96KV6 586 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 WDR24Q96S15 920 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 PSMB7Q99436 277 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 P2RY13Q9BPV8 354 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 CENPKQ9BS16 269 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 DCLK3Q9C098 648 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 KLHL4Q9C0H6 718 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 MFSD1Q9H3U5 465 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 C10orf88Q9H8K7 445 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 UNKLQ9H9P5 680 aaKnown RBP4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 LTB4R2Q9NPC1 389 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 HAUS2Q9NVX0 235 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 EURLQ9NYK6 297 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 TBC1D14Q9P2M4 693 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 WNT16Q9UBV4 365 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 OR12D3Q9UGF7 316 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 BAIAP2L1Q9UHR4 511 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 SLCO3A1Q9UIG8 710 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 STOML2Q9UJZ1 356 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 KCND3Q9UK17 655 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 NFU1Q9UMS0 254 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 GUCA1BQ9UMX6 200 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 L3MBTL1Q9Y468 752 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 ALG6Q9Y672 507 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 ITPR1Q14643 2758 aa4.73□□□□□ -1.65
ATPAF1-203ENST00000460928 A0A0J9YVX5 310 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 A0A1B0GVG6 124 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 LINC00854A0A1B0GVQ3 168 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 SMIM31A0A1B0GVY4 71 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 MAGEA13PA6NCF6 341 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 H0Y626 953 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 PLK4O00444 970 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 SLC9A3R1O14745 358 aaPredicted RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 HAT1O14929 419 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 SMAD6O43541 496 aaKnown RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 PRPSAP2O60256 369 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 CACNG3O60359 315 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 ZNF254O75437 659 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 SUPT3HO75486 399 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 B3GALNT1O75752 331 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 RPP40O75818 363 aaKnown RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 ZFPL1O95159 310 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 KLF8O95600 359 aaPredicted RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 F9P00740 461 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 KRT6AP02538 564 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 KRT6BP04259 564 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 PRKCHP24723 683 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 RBL1P28749 1068 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 TNFRSF8P28908 595 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 HMOX2P30519 316 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 GKP32189 559 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 CXCR5P32302 372 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 MPLP40238 635 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 ARSEP51690 589 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 THOP1P52888 689 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 METAP1P53582 386 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 ELLP55199 621 aaPredicted RBP4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 CDH6P55285 790 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 STARD6P59095 220 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 DYNLT1P63172 113 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 GAD2Q05329 585 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 MTAPQ13126 283 aa4.72□□□□□ -1.65
ATPAF1-203ENST00000460928 SRSF5Q13243 272 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms