RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 SEMA4FO95754 770 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 ANXA8P13928 327 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 UNC5DQ6UXZ4 953 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 B3GNT6Q6ZMB0 384 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 OR10H5Q8NGA6 315 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 OR56A1Q8NGH5 318 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 LRCH3Q96II8 777 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 TAPBPLQ9BX59 468 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 PAIP1Q9H074 479 aaKnown RBP17.12■□□□□ 0.33
CHRD-208ENST00000460627 TPT1P8Q9HAU6 139 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 MS4A12Q9NXJ0 267 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 MAPK10P53779 464 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 SLC2A7Q6PXP3 512 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 ZZZ3Q8IYH5 903 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 HIDE1A8MVS5 230 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 SDHDO14521 159 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 ERVFC1P60507 584 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 RPA4Q13156 261 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 OR5K1Q8NHB7 308 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 MOSPD2Q8NHP6 518 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 NT5C3BQ969T7 300 aa17.12■□□□□ 0.33
CHRD-208ENST00000460627 LAMTOR5O43504 91 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 REM1O75628 298 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 KLK3P07288 261 aaPredicted RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 CSTF2P33240 577 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHRD-208ENST00000460627 NRG3P56975 720 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 TMEM214Q6NUQ4 689 aaKnown RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 ZDHHC12Q96GR4 267 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 FBRSL1Q9HCM7 1045 aaKnown RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 STMN3Q9NZ72 180 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 LAMB2P55268 1798 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 RREB1Q92766 1687 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 NPIPB15A6NHN6 443 aaPredicted RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 E7ENX8 843 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 XRCC1P18887 633 aaPredicted RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 DUSP3P51452 185 aaPredicted RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 GRIK2Q13002 908 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 ZNF648Q5T619 568 aaPredicted RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 MZT2AQ6P582 158 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 DEFB119Q8N690 84 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 TOR4AQ9NXH8 423 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 ACTR3BQ9P1U1 418 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 CRNNQ9UBG3 495 aaPredicted RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 CA14Q9ULX7 337 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 LOC285095A0A1B0GVY8 99 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 RIIAD1A6NNX1 92 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 ARPC2O15144 300 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 JUPP14923 745 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 CCKBRP32239 447 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 GGT5P36269 586 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 YAP1P46937 504 aaKnown RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 CSNK2BP67870 215 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 RPP38P78345 283 aaKnown RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 CDK6Q00534 326 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 ANGPT1Q15389 498 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 ZNF630Q2M218 657 aaPredicted RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 PHF19Q5T6S3 580 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 NOXRED1Q6NXP6 359 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 POMZP3Q6PJE2 187 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 PRRG4Q9BZD6 226 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 RASSF1Q9NS23 344 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 SPATA6Q9NWH7 488 aaPredicted RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 DNMT3BQ9UBC3 853 aaKnown RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 PAPPA2Q9BXP8 1791 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 UBR3Q6ZT12 1888 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 ABLIM3O94929 683 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 ANGPTL1O95841 491 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 F11P03951 625 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 JUNP05412 331 aaKnown RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 PEX2P28328 305 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 MED22Q15528 200 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 EMC10Q5UCC4 262 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 HDHD2Q9H0R4 259 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 XKR8Q9H6D3 395 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 APOBEC3BQ9UH17 382 aaKnown RBP17.11■□□□□ 0.33
CHRD-208ENST00000460627 ACTL7AQ9Y615 435 aa17.11■□□□□ 0.33
CHRD-208ENST00000460627 SLC34A3Q8N130 599 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 SPPL3Q8TCT6 385 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 REEP4Q9H6H4 257 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 MYO5AQ9Y4I1 1855 aaKnown RBP17.1■□□□□ 0.33
CHRD-208ENST00000460627 TCRBV5S1A1TA0A578 114 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 JUNDP17535 347 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 TBPL1P62380 186 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 CDKL4Q5MAI5 379 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 ARHGAP40Q5TG30 622 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 SYVN1Q86TM6 617 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.1■□□□□ 0.33
CHRD-208ENST00000460627 NSUN5Q96P11 429 aaKnown RBP17.1■□□□□ 0.33
CHRD-208ENST00000460627 KLHL25Q9H0H3 589 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 TNFRSF10BO14763 440 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 CYP17A1P05093 508 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 HOXA9P31269 272 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 ISCA2Q86U28 154 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 ARRDC2Q8TBH0 407 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 GEMIN6Q8WXD5 167 aaKnown RBP17.1■□□□□ 0.33
CHRD-208ENST00000460627 ZHX1-C8orf76Q96EF9 292 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 EPB41L1Q9H4G0 881 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 SSR3Q9UNL2 185 aa17.1■□□□□ 0.33
CHRD-208ENST00000460627 LINC01553A4QN01 128 aa17.09■□□□□ 0.33
CHRD-208ENST00000460627 HNRNPA2B1P22626 353 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms