RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CRELD1Q96HD1 420 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 COQ7Q99807 217 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF221Q9UK13 617 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 COL18A1P39060 1754 aa14.33□□□□□ -0.11
PTPRU-205ENST00000460170 EDDM13A0A1B0GTR0 161 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 MYOCOSA0A1B0GUC4 107 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 CAPN14A8MX76 684 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 MMP20O60882 483 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 FGF18O76093 207 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 RASAL1O95294 804 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 ITGB1P05556 798 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 BCHEP06276 602 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 BCKDHAP12694 445 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 NUDT6P53370 316 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 ZFP69Q49AA0 526 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 CEACAM20Q6UY09 585 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 UTP4Q969X6 686 aaKnown RBP14.33□□□□□ -0.12
PTPRU-205ENST00000460170 TRIM39Q9HCM9 518 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 GIN1Q9NXP7 522 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 A0A096LPI6 279 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 AURKAO14965 403 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 AREL1O15033 823 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 B3GALT2O43825 422 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 PRMT3O60678 531 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 KHDRBS3O75525 346 aaKnown RBP14.33□□□□□ -0.12
PTPRU-205ENST00000460170 GBAP04062 536 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 TMEM115Q12893 351 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-205ENST00000460170 KCNAB2Q13303 367 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 TNFAIP8L3Q5GJ75 292 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 KIAA1614Q5VZ46 1190 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 TICAM1Q8IUC6 712 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 COX18Q8N8Q8 333 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 TBC1D17Q9HA65 648 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 OMPP47874 163 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 LAPTM4AQ15012 233 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 ABRAXAS2Q15018 415 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 CYBRD1Q53TN4 286 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 KANK2Q63ZY3 851 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 DPY19L3Q6ZPD9 716 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 ZNF420Q8TAQ5 688 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-205ENST00000460170 UFD1Q92890 307 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 ITPAQ9BY32 194 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 KCNN2Q9H2S1 579 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 ADAP2Q9NPF8 381 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 ZDHHC4Q9NPG8 344 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 EMCNQ9ULC0 261 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 ARHGEF33A8MVX0 844 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 TLR4O00206 839 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 ERI3O43414 337 aaKnown RBP14.33□□□□□ -0.12
PTPRU-205ENST00000460170 CCT3P49368 545 aaKnown RBP14.33□□□□□ -0.12
PTPRU-205ENST00000460170 STK19P49842 368 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-205ENST00000460170 MADCAM1Q13477 382 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 FBXO43Q4G163 708 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 KRTCAP2Q8N6L1 136 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 OR9A1PQ8NGU1 263 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 SNX33Q8WV41 574 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 FAM210AQ96ND0 272 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 MAPKAP1Q9BPZ7 522 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 YIPF4Q9BSR8 244 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 TMEM138Q9NPI0 162 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 MCUBQ9NWR8 336 aa14.33□□□□□ -0.12
PTPRU-205ENST00000460170 AKAP7Q9P0M2 348 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-205ENST00000460170 CFAP20Q9Y6A4 193 aaKnown RBP14.33□□□□□ -0.12
PTPRU-205ENST00000460170 LRP5O75197 1615 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 C2orf78A6NCI8 922 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 H7C0S8 307 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 PSIP1O75475 530 aaKnown RBP14.32□□□□□ -0.12
PTPRU-205ENST00000460170 HSD17B1P14061 328 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 ZNF763Q0D2J5 394 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 MORN1Q5T089 497 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 LIPJQ5W064 366 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 KDELC1Q6UW63 502 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 ANKFN1Q8N957 763 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 HDAC2Q92769 488 aaKnown RBP14.32□□□□□ -0.12
PTPRU-205ENST00000460170 IRF7Q92985 503 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 FUBP1Q96AE4 644 aaKnown RBP14.32□□□□□ -0.12
PTPRU-205ENST00000460170 TMCO6Q96DC7 493 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 DPEP2Q9H4A9 486 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 NEUROD4Q9HD90 331 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 RPRD1BQ9NQG5 326 aaKnown RBP14.32□□□□□ -0.12
PTPRU-205ENST00000460170 IKZF2Q9UKS7 526 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 TAF1P21675 1872 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 MCIDASD6RGH6 385 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 RFC2P35250 354 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 MYBPC1Q00872 1141 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 ANKRD26P1Q6NSI1 321 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 XKR5Q6UX68 686 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 OR4C6Q8NH72 309 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 SLC22A18Q96BI1 424 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 PPP1R14BQ96C90 147 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 CLEC4AQ9UMR7 237 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 MYH4Q9Y623 1939 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 ACTR1BP42025 376 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 AVPR1BP47901 424 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 ACTR1AP61163 376 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 EIPR1Q53HC9 387 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 SMARCD3Q6STE5 483 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 TRMT61BQ9BVS5 477 aaKnown RBP14.32□□□□□ -0.12
PTPRU-205ENST00000460170 ZNF696Q9H7X3 374 aa14.32□□□□□ -0.12
PTPRU-205ENST00000460170 MAP10Q9P2G4 905 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms