RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 ITGA3P26006 1051 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 GABRB3P28472 473 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 OR1D4P47884 311 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 AVPR1BP47901 424 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 GNG11P61952 73 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 SKP1P63208 163 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 TIAL1Q01085 375 aaKnown RBP eCLIP9.52□□□□□ -0.89
HDLBP-228ENST00000459788 KLC1Q07866 573 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 CUL1Q13616 776 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 BBS9Q3SYG4 887 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 MSS51Q4VC12 460 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 TEDDM1Q5T9Z0 273 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 THEMIS2Q5TEJ8 643 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 DUPD1Q68J44 220 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 CAPN13Q6MZZ7 669 aaPredicted RBP9.52□□□□□ -0.89
HDLBP-228ENST00000459788 AGTRAPQ6RW13 159 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 CYS1Q717R9 158 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 NDUFAF7Q7L592 441 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 PIWIL4Q7Z3Z4 852 aaKnown RBP9.52□□□□□ -0.89
HDLBP-228ENST00000459788 STRA8Q7Z7C7 330 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 C17orf64Q86WR6 236 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 TBC1D19Q8N5T2 526 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 CAMKVQ8NCB2 501 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 ABHD11Q8NFV4 315 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 EEF1AKMT1Q8WVE0 214 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 TM4SF19Q96DZ7 209 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 PHACTR1Q9C0D0 580 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 POPDC3Q9HBV1 291 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 CTSFQ9UBX1 484 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 C3orf18Q9UK00 162 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 PDE10AQ9Y233 779 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 VWA7Q9Y334 891 aa9.52□□□□□ -0.89
HDLBP-228ENST00000459788 KRT87PA6NCN2 255 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 FAM187AA6NFU0 413 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 EIF3HO15372 352 aaKnown RBP eCLIP9.51□□□□□ -0.897e-7■□□□□ 9.9
HDLBP-228ENST00000459788 TSPAN12O95859 305 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 ELK3P41970 407 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 TSFMP43897 325 aaKnown RBP9.51□□□□□ -0.89
HDLBP-228ENST00000459788 TBPL1P62380 186 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 CDKL1Q00532 357 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 MGAT5Q09328 741 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 PDAP1Q13442 181 aaKnown RBP9.51□□□□□ -0.89
HDLBP-228ENST00000459788 CRB2Q5IJ48 1285 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 RPUSD3Q6P087 351 aaKnown RBP9.51□□□□□ -0.89
HDLBP-228ENST00000459788 PAQR3Q6TCH7 311 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 TMEM205Q6UW68 189 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 ISLR2Q6UXK2 745 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 MAATS1Q7Z4T9 603 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 KBTBD2Q8IY47 623 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 NKAPQ8N5F7 415 aaKnown RBP9.51□□□□□ -0.89
HDLBP-228ENST00000459788 OR4K1Q8NGD4 311 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 OR56A3Q8NH54 315 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-228ENST00000459788 FBXL8Q96CD0 374 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 LINGO1Q96FE5 620 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 WDR77Q9BQA1 342 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-228ENST00000459788 RNF32Q9H0A6 362 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 ILKAPQ9H0C8 392 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-228ENST00000459788 SOX17Q9H6I2 414 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-228ENST00000459788 EPS8L2Q9H6S3 715 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 RIC8BQ9NVN3 520 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 MOCS1Q9NZB8 636 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 ZFATQ9P243 1243 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 SLC22A7Q9Y694 548 aa9.51□□□□□ -0.89
HDLBP-228ENST00000459788 IDSB3KWA1 339 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 H7BY64 318 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 HAT1O14929 419 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 FOXS1O43638 330 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 BMP10O95393 424 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 MED26O95402 600 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 DDAH2O95865 285 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 SERPINA7P05543 415 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 GSTA2P09210 222 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 SLC35G6P0C7Q6 338 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 MYBL2P10244 700 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 NPPBP16860 134 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 HNMTP50135 292 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 CCR8P51685 355 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 ITGA8P53708 1063 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 EMP2P54851 167 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 CDKN2DP55273 166 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 YBX1P67809 324 aaKnown RBP9.5□□□□□ -0.89
HDLBP-228ENST00000459788 CSNK1G2P78368 415 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 MFAP5Q13361 173 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 PWP1Q13610 501 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 TSTA3Q13630 321 aaPredicted RBP9.5□□□□□ -0.89
HDLBP-228ENST00000459788 TLR1Q15399 786 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 INAQ16352 499 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 HKDC1Q2TB90 917 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 PLEKHN1Q494U1 663 aaPredicted RBP9.5□□□□□ -0.89
HDLBP-228ENST00000459788 FHL5Q5TD97 284 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 HECTD2Q5U5R9 776 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 TMEM214Q6NUQ4 689 aaKnown RBP9.5□□□□□ -0.89
HDLBP-228ENST00000459788 ADCK2Q7Z695 626 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 IGDCC3Q8IVU1 814 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 AMER3Q8N944 861 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 PPFIBP2Q8ND30 876 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 MMABQ96EY8 250 aaPredicted RBP9.5□□□□□ -0.89
HDLBP-228ENST00000459788 VPS39Q96JC1 886 aa9.5□□□□□ -0.89
HDLBP-228ENST00000459788 SEC16BQ96JE7 1060 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms