RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SNX14Q9Y5W7 946 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 CNTNAP1P78357 1384 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PXDNLA1KZ92 1463 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 STK36Q9NRP7 1315 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 UBR3Q6ZT12 1888 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 TRPM1Q7Z4N2 1603 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 TRBV2A0A0J9YWF9 115 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 ELOVL7A1L3X0 281 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 TUBAL3A6NHL2 446 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 OR52A4PA6NMU1 304 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 PDZK1P1A8MUH7 402 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 BTBD18B2RXH4 712 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 HS3ST1O14792 307 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 LDLRAD4O15165 306 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 INSIG1O15503 277 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 UGDHO60701 494 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 RASSF9O75901 435 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 KRT75O95678 551 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 ENO1P06733 434 aaKnown RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 COX5BP10606 129 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 TYRP14679 529 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 FOSL2P15408 326 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 RPA2P15927 270 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 DPEP1P16444 411 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 NR1D1P20393 614 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 ZNF10P21506 573 aaPredicted RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 PTX3P26022 381 aaPredicted RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 GNA11P29992 359 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 SERPINB1P30740 379 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 PLK1P53350 603 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 SLC5A3P53794 718 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 CDH4P55283 916 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 CDH8P55286 799 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 AP1S2P56377 157 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 YWHAGP61981 247 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS41-209ENST00000457055 TNNC1P63316 161 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 SLC6A3Q01959 620 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 ROM1Q03395 351 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 SPP2Q13103 211 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 HEPACAMQ14CZ8 416 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 ELAVL1Q15717 326 aaKnown RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 SSX2Q16385 188 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 FSCN1Q16658 493 aaKnown RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 PNLIPRP3Q17RR3 467 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 SGSM1Q2NKQ1 1148 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 PRICKLE4Q2TBC4 344 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 AP5B1Q2VPB7 878 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 EPC2Q52LR7 807 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 LACTB2Q53H82 288 aaPredicted RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 PDZK1Q5T2W1 519 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 METTL21CQ5VZV1 264 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 ARL6IP4Q66PJ3 421 aaKnown RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 ANO7Q6IWH7 933 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 SLC25A25Q6KCM7 469 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 NCEH1Q6PIU2 408 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 FBXO46Q6PJ61 603 aaPredicted RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 PCSK4Q6UW60 755 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 VITQ6UXI7 678 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 PLEKHG7Q6ZR37 379 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 FRMD7Q6ZUT3 714 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 RD3Q7Z3Z2 195 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 CYP4Z1Q86W10 505 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 CDR2LQ86X02 465 aaPredicted RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 NRROSQ86YC3 692 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 HIPK1Q86Z02 1210 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 MCOLN2Q8IZK6 566 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 UBE2J2Q8N2K1 259 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 ZNF786Q8N393 782 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 GUF1Q8N442 669 aaKnown RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 CAMKVQ8NCB2 501 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 C17orf47Q8NEP4 570 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 OR10T2Q8NGX3 314 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 ESR2Q92731 530 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 BCL2L2Q92843 193 aaPredicted RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 MCUR1Q96AQ8 359 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 HAVCR1Q96D42 359 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 TMCO6Q96DC7 493 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 ERLEC1Q96DZ1 483 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 SAT2Q96F10 170 aaPredicted RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 SNX22Q96L94 193 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 CRAMP1Q96RY5 1269 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 PARK7Q99497 189 aaKnown RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 CHP1Q99653 195 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 GDF15Q99988 308 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 PCDHB16Q9NRJ7 776 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS41-209ENST00000457055 SACM1LQ9NTJ5 587 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 UFSP2Q9NUQ7 469 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 PDP1Q9P0J1 537 aaPredicted RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 CLEC2DQ9UHP7 191 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 TRMT6Q9UJA5 497 aaKnown RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 HAO1Q9UJM8 370 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 CCNL1Q9UK58 526 aaPredicted RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 VPS4AQ9UN37 437 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 RPH3ALQ9UNE2 315 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 MTO1Q9Y2Z2 717 aaKnown RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 AAR2Q9Y312 384 aaKnown RBP5.24□□□□□ -1.57
VPS41-209ENST00000457055 HEY1Q9Y5J3 304 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 RAD54BQ9Y620 910 aa5.24□□□□□ -1.57
VPS41-209ENST00000457055 KIF24Q5T7B8 1368 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms