RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 PCDHB11Q9Y5F2 797 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 A0A0G2JND7 137 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 EME2A4GXA9 379 aaPredicted RBP10.55□□□□□ -0.72
SCN9A-205ENST00000454569 MANBAO00462 879 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 SDHDO14521 159 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 HAT1O14929 419 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 YKT6O15498 198 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 NUDT21O43809 227 aaKnown RBP10.55□□□□□ -0.72
SCN9A-205ENST00000454569 SH3BGRLO75368 114 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 TGDSO95455 350 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 TBX6O95947 436 aaPredicted RBP10.55□□□□□ -0.72
SCN9A-205ENST00000454569 PDYNP01213 254 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 LMNAP02545 664 aaKnown RBP10.55□□□□□ -0.72
SCN9A-205ENST00000454569 PROS1P07225 676 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 CTSBP07858 339 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 UROSP10746 265 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 JUPP14923 745 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 CD1EP15812 388 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 MAGP20916 626 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 CCND1P24385 295 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 CD1CP29017 333 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 EPHA3P29320 983 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 CSF2RBP32927 897 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 ATXN3P54252 364 aaPredicted RBP10.55□□□□□ -0.72
SCN9A-205ENST00000454569 ZSCAN26Q16670 478 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 AMZ1Q400G9 498 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 GRHL2Q6ISB3 625 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 Q6ZSR9 355 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 SPATA21Q7Z572 469 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 C17orf64Q86WR6 236 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 RBM12BQ8IXT5 1001 aaKnown RBP10.55□□□□□ -0.72
SCN9A-205ENST00000454569 RAB42Q8N4Z0 105 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 ANKRD53Q8N9V6 530 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 FAM181AQ8N9Y4 354 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 ABHD11Q8NFV4 315 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 WDR20Q8TBZ3 569 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 PRRX2Q99811 253 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 MACROD1Q9BQ69 325 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 HAUS8Q9BT25 410 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 EDEM2Q9BV94 578 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 TMEM120AQ9BXJ8 343 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 TRIM55Q9BYV6 548 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 MRPS30Q9NP92 439 aaKnown RBP10.55□□□□□ -0.72
SCN9A-205ENST00000454569 KCNK4Q9NYG8 393 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 ATXN7L1Q9ULK2 861 aaPredicted RBP10.55□□□□□ -0.72
SCN9A-205ENST00000454569 CCL27Q9Y4X3 112 aa10.55□□□□□ -0.72
SCN9A-205ENST00000454569 FAM186AA6NE01 2351 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 A0A1W2PQM1 296 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 ZNF839A8K0R7 811 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 HDAC3O15379 428 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 CTSVO60911 334 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 ETHE1O95571 254 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 ZNF883P0CG24 379 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 ST6GAL1P15907 406 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 AMD1P17707 334 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 BIRC2Q13490 618 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 KIR2DS3Q14952 304 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 NR1D2Q14995 579 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 NR0B2Q15466 257 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 TBCCQ15814 346 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 CSRP2Q16527 193 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 GGTA1PQ4G0N0 100 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 LIPJQ5W064 366 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 TMEM198Q66K66 360 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 ZNF425Q6IV72 752 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 FBXO42Q6P3S6 717 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 SPESP1Q6UW49 350 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 ZNF574Q6ZN55 896 aaPredicted RBP10.54□□□□□ -0.72
SCN9A-205ENST00000454569 FAM92BQ6ZTR7 304 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 DGLUCYQ7Z3D6 616 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 SPRED1Q7Z699 444 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 OOSP2Q86WS3 158 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 ANKS4BQ8N8V4 417 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 CCDC197Q8NCU1 140 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 OR7G3Q8NG95 312 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 NCSTNQ92542 709 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 PTCD3Q96EY7 689 aaKnown RBP10.54□□□□□ -0.72
SCN9A-205ENST00000454569 SEC16BQ96JE7 1060 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 MAP3K3Q99759 626 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 DUSP23Q9BVJ7 150 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 AICDAQ9GZX7 198 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 FAM60AQ9NP50 221 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 KLHL14Q9P2G3 628 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 NCDNQ9UBB6 729 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 POMT2Q9UKY4 750 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 FER1L5A0AVI2 2057 aa10.54□□□□□ -0.72
SCN9A-205ENST00000454569 FAM221BA6H8Z2 402 aa10.53□□□□□ -0.72
SCN9A-205ENST00000454569 C4orf47A7E2U8 309 aa10.53□□□□□ -0.72
SCN9A-205ENST00000454569 C2orf74A8MZ97 194 aa10.53□□□□□ -0.72
SCN9A-205ENST00000454569 EBAG9O00559 213 aa10.53□□□□□ -0.72
SCN9A-205ENST00000454569 CAPN5O15484 640 aaPredicted RBP10.53□□□□□ -0.72
SCN9A-205ENST00000454569 KDM1AO60341 852 aa10.53□□□□□ -0.72
SCN9A-205ENST00000454569 DIAPH2O60879 1101 aa10.53□□□□□ -0.72
SCN9A-205ENST00000454569 ENO1P06733 434 aaKnown RBP10.53□□□□□ -0.72
SCN9A-205ENST00000454569 TROVE2P10155 538 aaKnown RBP eCLIP10.53□□□□□ -0.72
SCN9A-205ENST00000454569 ALPPL2P10696 532 aa10.53□□□□□ -0.72
SCN9A-205ENST00000454569 HMOX2P30519 316 aa10.53□□□□□ -0.72
SCN9A-205ENST00000454569 BCL6P41182 706 aa10.53□□□□□ -0.72
SCN9A-205ENST00000454569 CAPZBP47756 277 aa10.53□□□□□ -0.72
SCN9A-205ENST00000454569 NAA20P61599 178 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms