RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CLHC1Q8NHS4 586 aa10.36□□□□□ -0.75
PKP4-206ENST00000452162 FCRL1Q96LA6 429 aa10.36□□□□□ -0.75
PKP4-206ENST00000452162 CCDC138Q96M89 665 aa10.36□□□□□ -0.75
PKP4-206ENST00000452162 FRG2BQ96QU4 278 aa10.36□□□□□ -0.75
PKP4-206ENST00000452162 ARRDC1-AS1Q9H2J1 176 aa10.36□□□□□ -0.75
PKP4-206ENST00000452162 TMEM74BQ9NUR3 256 aa10.36□□□□□ -0.75
PKP4-206ENST00000452162 SLC25A37Q9NYZ2 338 aa10.36□□□□□ -0.75
PKP4-206ENST00000452162 STOX2Q9P2F5 926 aaPredicted RBP10.36□□□□□ -0.75
PKP4-206ENST00000452162 GULP1Q9UBP9 304 aa10.36□□□□□ -0.75
PKP4-206ENST00000452162 MAGEL2Q9UJ55 1249 aa10.36□□□□□ -0.75
PKP4-206ENST00000452162 DMXL1Q9Y485 3027 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 TBC1D3DA0A087WVF3 549 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 TBC1D3IA0A087WXS9 549 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 TBC1D3EA0A087X179 549 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 TBC1D3KA0A087X1G2 549 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 TRBV5-3A0A0A0MS03 114 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 TBC1D3FA6NER0 549 aaPredicted RBP10.35□□□□□ -0.75
PKP4-206ENST00000452162 METTL12A8MUP2 240 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 TBC1D3LB9A6J9 549 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 K7ESM1 405 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 RECQL5O94762 991 aaPredicted RBP10.35□□□□□ -0.75
PKP4-206ENST00000452162 EPN2O95208 641 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 CATP04040 527 aaKnown RBP10.35□□□□□ -0.75
PKP4-206ENST00000452162 TBC1D3HP0C7X1 549 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 SMIM18P0DKX4 95 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 PRPS2P11908 318 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 CKMT2P17540 419 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 CD22P20273 847 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 FASP25445 335 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 PLA2G5P39877 138 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 HALP42357 657 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 BDKRB1P46663 353 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 PPP2CBP62714 309 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 PPP2CAP67775 309 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 PLIN5Q00G26 463 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 PCDH1Q08174 1060 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 ELP6Q0PNE2 266 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 MAPKAPK3Q16644 382 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 INTS11Q5TA45 600 aaKnown RBP10.35□□□□□ -0.75
PKP4-206ENST00000452162 LIPJQ5W064 366 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 LYSMD4Q5XG99 296 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 TBC1D3GQ6DHY5 549 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 TBC1D3CQ6IPX1 549 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 XKR5Q6UX68 686 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 THOC6Q86W42 341 aaKnown RBP10.35□□□□□ -0.75
PKP4-206ENST00000452162 TBC1D3Q8IZP1 549 aaPredicted RBP10.35□□□□□ -0.75
PKP4-206ENST00000452162 DTWD1Q8N5C7 304 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 CADM4Q8NFZ8 388 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 ATL1Q8WXF7 558 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 BIRC7Q96CA5 298 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 FAM122AQ96E09 287 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 NUS1Q96E22 293 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 APIPQ96GX9 242 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 LOXL4Q96JB6 756 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 CNBD2Q96M20 576 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 ZNF583Q96ND8 569 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 CCDC115Q96NT0 180 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 OSBPL11Q9BXB4 747 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 SMOC1Q9H4F8 434 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 PIF1Q9H611 641 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 ANAPC2Q9UJX6 822 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 TMED5Q9Y3A6 229 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 SLCO1B1Q9Y6L6 691 aa10.35□□□□□ -0.75
PKP4-206ENST00000452162 LRRC72A6NJI9 287 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 C10orf142B7Z368 130 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 SOCS2O14508 198 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 GFRA3O60609 400 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 IGHV4-34P06331 123 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 RETP07949 1114 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 FCGR1AP12314 374 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 AMD1P17707 334 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 SDC1P18827 310 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 GGT1P19440 569 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 TACR1P25103 407 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 PDHA2P29803 388 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 MAPK9P45984 424 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 CCT8P50990 548 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 PHC1P78364 1004 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 MYBPC1Q00872 1141 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 ZNF33BQ06732 778 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 TMEM52BQ4KMG9 183 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 AGTRAPQ6RW13 159 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 ZBTB49Q6ZSB9 765 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 TRIM74Q86UV6 250 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 PACRGLQ8N7B6 248 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 OR56A3Q8NH54 315 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 SNX19Q92543 992 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 PIGKQ92643 395 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 CENPNQ96H22 339 aaPredicted RBP10.34□□□□□ -0.75
PKP4-206ENST00000452162 OR4K3Q96R72 315 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 OR52E6Q96RD3 313 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 PKP4Q99569 1192 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 IKZF5Q9H5V7 419 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 NCDNQ9UBB6 729 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 GMEB2Q9UKD1 530 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 MAN2B2Q9Y2E5 1009 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.34□□□□□ -0.75
PKP4-206ENST00000452162 ARHGAP10A1A4S6 786 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 FAM149AA5PLN7 773 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 SAC3D1A6NKF1 404 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms