RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 C19orf57Q0VDD7 668 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 FAM53BQ14153 422 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 OR4D1Q15615 310 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 MUM1Q2TAK8 710 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 C18orf21Q32NC0 220 aaPredicted RBP15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 CDKL4Q5MAI5 379 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 THEMIS2Q5TEJ8 643 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 CPZQ66K79 652 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 PRMT9Q6P2P2 845 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 PPP1R32Q7Z5V6 425 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 ADAMTSL2Q86TH1 951 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 ISCA2Q86U28 154 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 C17orf64Q86WR6 236 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 CTAGE3PQ8IX95 158 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 SHISA5Q8N114 240 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 CEP112Q8N8E3 955 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 AMER3Q8N944 861 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 TTC29Q8NA56 475 aaPredicted RBP15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 NEIL2Q969S2 332 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 KIAA1191Q96A73 305 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 NACC2Q96BF6 587 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 MVB12AQ96EY5 273 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 TSPAN17Q96FV3 270 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 ARHGAP9Q9BRR9 750 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 SPNS1Q9H2V7 528 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 L2HGDHQ9H9P8 463 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 IGSF5Q9NSI5 407 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 CTNNAL1Q9UBT7 734 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 CTSFQ9UBX1 484 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 TLK1Q9UKI8 766 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 CCDC88CQ9P219 2028 aa15.34■□□□□ 0.05
SCAMP4-205ENST00000452128 PRAMEF4O60810 478 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 GUCA1CO95843 209 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 PDGFAP04085 211 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 EIF2S1P05198 315 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 RPS15AP62244 130 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 SLC9A5Q14940 896 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 TGFBIQ15582 683 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 CATSPEREQ5SY80 951 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 PRAMEF9Q5VWM5 478 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 CMC1Q7Z7K0 106 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 MRGPREQ86SM8 312 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 THOC6Q86W42 341 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 ZNF740Q8NDX6 193 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 IFT81Q8WYA0 676 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 GPR78Q96P69 363 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 TXLNGYQ9BZA5 131 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 UNKQ9C0B0 810 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 TSPYL1Q9H0U9 437 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 CDC42EP4Q9H3Q1 356 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 ABCF3Q9NUQ8 709 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 IRAK4Q9NWZ3 460 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 PTBP2Q9UKA9 531 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 MAN2B2Q9Y2E5 1009 aa15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 PTRH2Q9Y3E5 179 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-205ENST00000452128 FEZF1A0PJY2 475 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 TXNDC9O14530 226 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 DNAJB5O75953 348 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 PIM1P11309 404 aaPredicted RBP15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 CRABP2P29373 138 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 HNMTP50135 292 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 ATP6V0D1P61421 351 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 ATP1A4Q13733 1029 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 TMEM214Q6NUQ4 689 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 TCTN3Q6NUS6 607 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 CENPLQ8N0S6 344 aaPredicted RBP15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 AFAP1L2Q8N4X5 818 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 MFSD9Q8NBP5 474 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 SLC44A1Q8WWI5 657 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 ISL2Q96A47 359 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 TRIM44Q96DX7 344 aaPredicted RBP15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 CYTH2Q99418 400 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 FMO2Q99518 471 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 MACROD1Q9BQ69 325 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 TMEM79Q9BSE2 394 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 TGIF2Q9GZN2 237 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 ING2Q9H160 280 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 ZNF304Q9HCX3 659 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 TXNDC16Q9P2K2 825 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 COPG2Q9UBF2 871 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 MTRF1LQ9UGC7 380 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 SLC22A14Q9Y267 594 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 PADI2Q9Y2J8 665 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 MAU2Q9Y6X3 613 aa15.32■□□□□ 0.04
SCAMP4-205ENST00000452128 TRBC2A0A5B9 178 aa15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 EIF4E1BA6NMX2 242 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 SOCS6O14544 535 aa15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 RFPL1O75677 317 aa15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 ALDOAP04075 364 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 ANXA5P08758 320 aa15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 MTHFD2P13995 350 aa15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 EPORP19235 508 aa15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 MMP11P24347 488 aa15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 GDF5P43026 501 aa15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 MAGEA12P43365 314 aa15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 SCTRP47872 440 aa15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 CCR8P51685 355 aa15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 EFNA3P52797 238 aa15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 SLC12A2P55011 1212 aa15.31■□□□□ 0.04
SCAMP4-205ENST00000452128 SOX8P57073 446 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms