RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 PDIK1LQ8N165 341 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 AMER2Q8N7J2 671 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 MCOLN3Q8TDD5 553 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 C8orf44Q96CB5 159 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 LRRC39Q96DD0 335 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 TM4SF19Q96DZ7 209 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 LINGO1Q96FE5 620 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 PSMG3-AS1Q96PY0 264 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 BARD1Q99728 777 aaKnown RBP11.74□□□□□ -0.53
MSH5-209ENST00000450148 NAPGQ99747 312 aaPredicted RBP11.74□□□□□ -0.53
MSH5-209ENST00000450148 TGIF2Q9GZN2 237 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 ATG10Q9H0Y0 220 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 CCDC177Q9NQR7 707 aaPredicted RBP11.74□□□□□ -0.53
MSH5-209ENST00000450148 UTP6Q9NYH9 597 aaKnown RBP11.74□□□□□ -0.53
MSH5-209ENST00000450148 C3orf18Q9UK00 162 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 IKZF3Q9UKT9 509 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 VPS4AQ9UN37 437 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 CDC14AQ9UNH5 594 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 NTNG1Q9Y2I2 539 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 SAR1BQ9Y6B6 198 aa11.74□□□□□ -0.53
MSH5-209ENST00000450148 KCNE1BA0A087WTH5 132 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 A0A0A6YYC8 382 aaPredicted RBP11.73□□□□□ -0.53
MSH5-209ENST00000450148 IDSB3KWA1 339 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 E7ESA3 106 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 CCDC188H7C350 402 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 I3L1I5 382 aaPredicted RBP11.73□□□□□ -0.53
MSH5-209ENST00000450148 LCMT2O60294 686 aaKnown RBP11.73□□□□□ -0.53
MSH5-209ENST00000450148 KLHL18O94889 574 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 HPP00738 406 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 STATHP02808 62 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 COX6A1P12074 109 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 NPPBP16860 134 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 HRH2P25021 359 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 RGS4P49798 205 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 NAE1Q13564 534 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 FASTKD3Q14CZ7 662 aaKnown RBP11.73□□□□□ -0.53
MSH5-209ENST00000450148 HIF1AQ16665 826 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 THEMIS2Q5TEJ8 643 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 LCTLQ6UWM7 567 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 PRSS41Q7RTY9 318 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 ADCK2Q7Z695 626 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 ZGRF1Q86YA3 2104 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 RP1L1Q8IWN7 2480 aaPredicted RBP11.73□□□□□ -0.53
MSH5-209ENST00000450148 ZC3H7AQ8IWR0 971 aaKnown RBP11.73□□□□□ -0.53
MSH5-209ENST00000450148 IQCKQ8N0W5 287 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 MYO1HQ8N1T3 1032 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 ZADH2Q8N4Q0 377 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 OR56A3Q8NH54 315 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 PPP4R1Q8TF05 950 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 PSMF1Q92530 271 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 USP9XQ93008 2570 aaPredicted RBP11.73□□□□□ -0.53
MSH5-209ENST00000450148 RERGQ96A58 199 aaPredicted RBP11.73□□□□□ -0.53
MSH5-209ENST00000450148 MMABQ96EY8 250 aaPredicted RBP11.73□□□□□ -0.53
MSH5-209ENST00000450148 CFAP36Q96G28 342 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 RUNDC3BQ96NL0 473 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 MCMBPQ9BTE3 642 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 LHPPQ9H008 270 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 DRC3Q9H069 523 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 ASF1BQ9NVP2 202 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 MOCS1Q9NZB8 636 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 TRPC4Q9UBN4 977 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 CORO1CQ9ULV4 474 aaPredicted RBP11.73□□□□□ -0.53
MSH5-209ENST00000450148 VWA7Q9Y334 891 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 PCDHGA10Q9Y5H3 936 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 PSAT1Q9Y617 370 aa11.73□□□□□ -0.53
MSH5-209ENST00000450148 LOC102723996A0A087X1L8 192 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 FEZF1A0PJY2 475 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 TXNDC9O14530 226 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 MAP2K7O14733 419 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 PRPF4O43172 522 aaKnown RBP eCLIP11.72□□□□□ -0.53
MSH5-209ENST00000450148 RNF224P0DH78 156 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 ACPPP15309 386 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 BCL6P41182 706 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 RPL21P46778 160 aaKnown RBP11.72□□□□□ -0.53
MSH5-209ENST00000450148 EMP2P54851 167 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 RPS15AP62244 130 aaKnown RBP11.72□□□□□ -0.53
MSH5-209ENST00000450148 MAT1AQ00266 395 aaKnown RBP11.72□□□□□ -0.53
MSH5-209ENST00000450148 MRPL49Q13405 166 aaKnown RBP11.72□□□□□ -0.53
MSH5-209ENST00000450148 FAM45BPQ6NSW5 357 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 TMEM214Q6NUQ4 689 aaKnown RBP11.72□□□□□ -0.53
MSH5-209ENST00000450148 TMEM205Q6UW68 189 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 SBSNQ6UWP8 590 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 ANKMY2Q8IV38 441 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 CISD2Q8N5K1 135 aaKnown RBP11.72□□□□□ -0.53
MSH5-209ENST00000450148 GPATCH11Q8N954 259 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 GABPB2Q8TAK5 448 aaPredicted RBP11.72□□□□□ -0.53
MSH5-209ENST00000450148 FAM45AQ8TCE6 357 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 TM9SF4Q92544 642 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 THAP11Q96EK4 314 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 SNF8Q96H20 258 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 PDLIM5Q96HC4 596 aaKnown RBP11.72□□□□□ -0.53
MSH5-209ENST00000450148 THOC3Q96J01 351 aaKnown RBP11.72□□□□□ -0.53
MSH5-209ENST00000450148 OR4K3Q96R72 315 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 MACROD1Q9BQ69 325 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 WDR77Q9BQA1 342 aaPredicted RBP11.72□□□□□ -0.53
MSH5-209ENST00000450148 SARGQ9BW04 601 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 PCBD2Q9H0N5 130 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 ZNF160Q9HCG1 818 aa11.72□□□□□ -0.53
MSH5-209ENST00000450148 MKKSQ9NPJ1 570 aaPredicted RBP11.72□□□□□ -0.53
MSH5-209ENST00000450148 C14orf105Q9NVL8 296 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms