RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 TXNDC9O14530 226 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 PRPF4O43172 522 aaKnown RBP eCLIP12.44□□□□□ -0.42
SEC22C-209ENST00000449617 FOXS1O43638 330 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 KLHL41O60662 606 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 IPO13O94829 963 aaKnown RBP12.44□□□□□ -0.42
SEC22C-209ENST00000449617 ANXA5P08758 320 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 UQCRFS1P47985 274 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 SNRPNP63162 240 aaKnown RBP12.44□□□□□ -0.42
SEC22C-209ENST00000449617 PDIA2Q13087 525 aaKnown RBP12.44□□□□□ -0.42
SEC22C-209ENST00000449617 NAE1Q13564 534 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 FRG1Q14331 258 aaKnown RBP12.44□□□□□ -0.42
SEC22C-209ENST00000449617 INPP5JQ15735 1006 aaPredicted RBP12.44□□□□□ -0.42
SEC22C-209ENST00000449617 FAM45BPQ6NSW5 357 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 CLEC18BQ6UXF7 455 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 VN1R4Q7Z5H5 301 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 C17orf64Q86WR6 236 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 CLEC18CQ8NCF0 446 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 GALNT11Q8NCW6 608 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 FBXO36Q8NEA4 188 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 FAM45AQ8TCE6 357 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 ALKBH8Q96BT7 664 aaKnown RBP12.44□□□□□ -0.42
SEC22C-209ENST00000449617 MMABQ96EY8 250 aaPredicted RBP12.44□□□□□ -0.42
SEC22C-209ENST00000449617 YIPF2Q9BWQ6 316 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 SGPP1Q9BX95 441 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 PCBD2Q9H0N5 130 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 ZBTB20Q9HC78 741 aaPredicted RBP12.44□□□□□ -0.42
SEC22C-209ENST00000449617 TMEM184CQ9NVA4 438 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 ZFATQ9P243 1243 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 B3GNT3Q9Y2A9 372 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 VWA7Q9Y334 891 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 SNX24Q9Y343 169 aa12.44□□□□□ -0.42
SEC22C-209ENST00000449617 MRPS2Q9Y399 296 aaKnown RBP12.44□□□□□ -0.42
SEC22C-209ENST00000449617 SCN3AQ9NY46 2000 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 SPTBN1Q01082 2364 aaKnown RBP12.43□□□□□ -0.42
SEC22C-209ENST00000449617 IDSB3KWA1 339 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 E7ESA3 106 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 MAP2K7O14733 419 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 VPS4BO75351 444 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 CDH1P12830 882 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 ACPPP15309 386 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 GNLYP22749 145 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 HRH2P25021 359 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 SLC26A3P40879 764 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 RPS15AP62244 130 aaKnown RBP12.43□□□□□ -0.42
SEC22C-209ENST00000449617 CSNK1G2P78368 415 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 SRSF1Q07955 248 aaKnown RBP eCLIP12.43□□□□□ -0.42
SEC22C-209ENST00000449617 MGAT5Q09328 741 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 UBAP2LQ14157 1087 aaKnown RBP12.43□□□□□ -0.42
SEC22C-209ENST00000449617 PLEKHN1Q494U1 663 aaPredicted RBP12.43□□□□□ -0.42
SEC22C-209ENST00000449617 IGFL3Q6UXB1 125 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 LAPTM4BQ86VI4 370 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 PARP9Q8IXQ6 854 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 TM9SF4Q92544 642 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 C8orf44Q96CB5 159 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 VPS50Q96JG6 964 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 MACROD1Q9BQ69 325 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 C14orf105Q9NVL8 296 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 ARL15Q9NXU5 204 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 IKZF3Q9UKT9 509 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 VPS4AQ9UN37 437 aa12.43□□□□□ -0.42
SEC22C-209ENST00000449617 USP9YO00507 2555 aaPredicted RBP12.43□□□□□ -0.42
SEC22C-209ENST00000449617 HIVEP3Q5T1R4 2406 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 KCNE1BA0A087WTH5 132 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 PABPN1LA6NDY0 278 aaKnown RBP12.42□□□□□ -0.42
SEC22C-209ENST00000449617 HPP00738 406 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 HIST1H2AGP0C0S8 130 aaPredicted RBP12.42□□□□□ -0.42
SEC22C-209ENST00000449617 HIST1H2ADP20671 130 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 SAT1P21673 171 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 CCND1P24385 295 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 BCL6P41182 706 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 EMP2P54851 167 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 MAT1AQ00266 395 aaKnown RBP12.42□□□□□ -0.42
SEC22C-209ENST00000449617 Q0VFX4 171 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 FAM53BQ14153 422 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 NDUFA9Q16795 377 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 SYT16Q17RD7 645 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 ZXDCQ2QGD7 858 aaPredicted RBP12.42□□□□□ -0.42
SEC22C-209ENST00000449617 IRAK1BP1Q5VVH5 260 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 CAPN13Q6MZZ7 669 aaPredicted RBP12.42□□□□□ -0.42
SEC22C-209ENST00000449617 LCTLQ6UWM7 567 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 STRA8Q7Z7C7 330 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 ZC3HC1Q86WB0 502 aaKnown RBP12.42□□□□□ -0.42
SEC22C-209ENST00000449617 ZC3H7AQ8IWR0 971 aaKnown RBP12.42□□□□□ -0.42
SEC22C-209ENST00000449617 C17orf53Q8N3J3 647 aaPredicted RBP12.42□□□□□ -0.42
SEC22C-209ENST00000449617 ZADH2Q8N4Q0 377 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 OR9A4Q8NGU2 314 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 HIST1H2AHQ96KK5 128 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 HIST1H2AJQ99878 128 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 H2AFJQ9BTM1 129 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 LHPPQ9H008 270 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 ILKAPQ9H0C8 392 aaPredicted RBP12.42□□□□□ -0.42
SEC22C-209ENST00000449617 ZNF160Q9HCG1 818 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 MKKSQ9NPJ1 570 aaPredicted RBP12.42□□□□□ -0.42
SEC22C-209ENST00000449617 MAP10Q9P2G4 905 aa12.42□□□□□ -0.42
SEC22C-209ENST00000449617 FEZF1A0PJY2 475 aa12.41□□□□□ -0.42
SEC22C-209ENST00000449617 GUCA1CO95843 209 aa12.41□□□□□ -0.42
SEC22C-209ENST00000449617 NPPBP16860 134 aa12.41□□□□□ -0.42
SEC22C-209ENST00000449617 ZNF37AP17032 561 aaPredicted RBP12.41□□□□□ -0.42
SEC22C-209ENST00000449617 AVPR1BP47901 424 aa12.41□□□□□ -0.42
SEC22C-209ENST00000449617 AP1S2P56377 157 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms