RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 SPIN4Q56A73 249 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 TMEM198Q66K66 360 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 FOXR2Q6PJQ5 311 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 MSANTD1Q6ZTZ1 278 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 RABEPKQ7Z6M1 372 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 TRAPPC6BQ86SZ2 158 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 DCUN1D3Q8IWE4 304 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 DENND6BQ8NEG7 585 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 PLEKHG4BQ96PX9 1271 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 TRIM39Q9HCM9 518 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 LYARQ9NX58 379 aaKnown RBP12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 SPATA7Q9P0W8 599 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 A0A0D9SEW6 157 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 MYADML2A6NDP7 307 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 SLC33A1O00400 549 aaPredicted RBP12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 PLK4O00444 970 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 FOLR3P41439 243 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 FCHO2Q0JRZ9 810 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 MANEAQ5SRI9 462 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 VWA5B1Q5TIE3 1220 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 PIM3Q86V86 326 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 HORMAD2Q8N7B1 307 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 OR14L1PQ8NHC6 308 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 C17orf62Q9BQA9 187 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 ACSL5Q9ULC5 683 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 OR1A2Q9Y585 309 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 FAM172BPA6NC97 362 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 PRH1P02810 166 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 ACSL1P33121 698 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 PPIDQ08752 370 aaKnown RBP12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 KCTD21Q4G0X4 260 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 GPR107Q5VW38 600 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 MFSD5Q6N075 450 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 RNF111Q6ZNA4 994 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 TBC1D21Q8IYX1 336 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 GSTCDQ8NEC7 633 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 LPGAT1Q92604 370 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 EFCAB11Q9BUY7 163 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 SDCBP2Q9H190 292 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 STOML2Q9UJZ1 356 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 R3HDM2Q9Y2K5 976 aaKnown RBP12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 FSCN2O14926 492 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 ALOX15BO15296 676 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 SLC7A4O43246 635 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 PLCXD2Q0VAA5 305 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 TTYH2Q9BSA4 534 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 ISPDA4D126 451 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 C2orf78A6NCI8 922 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 ANKRD66B4E2M5 251 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 ADAMDEC1O15204 470 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 LIMK2P53671 638 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 NTHL1P78549 312 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 HHEXQ03014 270 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 MLC1Q15049 377 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 PLGLAQ15195 96 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 PERM1Q5SV97 790 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 THOC7Q6I9Y2 204 aaKnown RBP12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 OSTM1Q86WC4 334 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 HM13Q8TCT9 377 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 RBM4BQ9BQ04 359 aaKnown RBP12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 RBM4Q9BWF3 364 aaKnown RBP12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 FN3KQ9H479 309 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 PIGVQ9NUD9 493 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 F2P00734 622 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 ARPC4P59998 168 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 KLF1Q13351 362 aaPredicted RBP12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 RCAN2Q14206 197 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 GPRC6AQ5T6X5 926 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 MREGQ8N565 214 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 NXPE2Q96DL1 559 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 B4GALT6Q9UBX8 382 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 WBP11Q9Y2W2 641 aaKnown RBP12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 A8MVJ9 347 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 TSPAN6O43657 245 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 APBB3O95704 486 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 ABATP80404 500 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 ST3GAL4Q11206 333 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 ALG10Q5BKT4 473 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 DENND5AQ6IQ26 1287 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 POP5Q969H6 163 aaKnown RBP12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 CLPTM1LQ96KA5 538 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 LENG8Q96PV6 779 aaPredicted RBP12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 OR51B5Q9H339 312 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 HPF1Q9NWY4 346 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 C3P01024 1663 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 H7BY64 318 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 MT-ND5P03915 603 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 SDC2P34741 201 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 RABIFP47224 123 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 HMGCS1Q01581 520 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 ARL13AQ5H913 290 aaPredicted RBP12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 IDNKQ5T6J7 187 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 PLCZ1Q86YW0 608 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 SLC30A8Q8IWU4 369 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 GPALPP1Q8IXQ4 340 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 DOK4Q8TEW6 326 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 PRAP1Q96NZ9 151 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 ING4Q9UNL4 249 aa12.37□□□□□ -0.43
AC006001.3-201ENST00000449307 PDCD5O14737 125 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms