RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 RAB21Q9UL25 225 aa13.41□□□□□ -0.26
GTF3C3-206ENST00000448539 SH2B3Q9UQQ2 575 aa13.41□□□□□ -0.26
GTF3C3-206ENST00000448539 SMG1Q96Q15 3661 aaKnown RBP13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 TLDC2A0PJX2 215 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 HYKKA2RU49 373 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 C21orf140B9A014 251 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 C9J4A7 227 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 H3BMH7 237 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 CLGNO14967 610 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 TAPBPO15533 448 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 CDH16O75309 829 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 H2AFYO75367 372 aaKnown RBP13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 RFPL1O75677 317 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 RORAP35398 523 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 GGT5P36269 586 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 RPS15P62841 145 aaKnown RBP13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 VAC14Q08AM6 782 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 CDC16Q13042 620 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 SRSF6Q13247 344 aaKnown RBP13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 COL9A2Q14055 689 aaPredicted RBP13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 PDK4Q16654 411 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 FBXO48Q5FWF7 155 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 TECRLQ5HYJ1 363 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 CATSPEREQ5SY80 951 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 ARHGAP40Q5TG30 622 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 C1orf189Q5VU69 101 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 NXPE4Q6UWF7 544 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 LRRC70Q7Z2Q7 622 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 TMPRSS11BQ86T26 416 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 TDRPQ86YL5 185 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 KLHDC8AQ8IYD2 350 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 PLD6Q8N2A8 252 aaKnown RBP13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 SLC38A9Q8NBW4 561 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 ACMSDQ8TDX5 336 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 EPS8L3Q8TE67 593 aaKnown RBP13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 CT55Q8WUE5 264 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 ESAMQ96AP7 390 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 CRELD1Q96HD1 420 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 GPR78Q96P69 363 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 OR2A5Q96R48 311 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 AIF1LQ9BQI0 150 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 TMEM79Q9BSE2 394 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 CD244Q9BZW8 370 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 CHST8Q9H2A9 424 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 CPNE5Q9HCH3 593 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 ZNF358Q9NW07 568 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 GPRC5BQ9NZH0 403 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 CPSF2Q9P2I0 782 aaKnown RBP13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 GPN3Q9UHW5 284 aaPredicted RBP13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 TMCO1Q9UM00 188 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 ANGPTL3Q9Y5C1 460 aa13.4□□□□□ -0.26
GTF3C3-206ENST00000448539 AHCTF1Q8WYP5 2266 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 PCM1Q15154 2024 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 KCNE1BA0A087WTH5 132 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 A0A1B0GX78 115 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 FEZF1A0PJY2 475 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 FITM1A5D6W6 292 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 MAP2K7O14733 419 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 EFSO43281 561 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 OR1F1O43749 312 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 SMIM24O75264 130 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 PIM1P11309 404 aaPredicted RBP13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 CXCR2P25025 360 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 DCDP81605 110 aaKnown RBP13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 MC1RQ01726 317 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 DNASE1L3Q13609 305 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 RASA2Q15283 850 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 NDUFA9Q16795 377 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 PFKFB4Q16877 469 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 MUM1Q2TAK8 710 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 SOWAHCQ53LP3 525 aaPredicted RBP13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 FAM199XQ6PEV8 388 aaPredicted RBP13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 LCA5Q86VQ0 697 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 CAMKVQ8NCB2 501 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 OR4K1Q8NGD4 311 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 SLC45A3Q96JT2 553 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 MRPL57Q9BQC6 102 aaKnown RBP13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 GPR87Q9BY21 358 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 MRPL46Q9H2W6 279 aaKnown RBP13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 PRM3Q9NNZ6 103 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 ENAMQ9NRM1 1142 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 XPR1Q9UBH6 696 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 OPTCQ9UBM4 332 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 ANKRD12Q6UB98 2062 aa13.39□□□□□ -0.27
GTF3C3-206ENST00000448539 CACNA1GO43497 2377 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 TRBC2A0A5B9 178 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 ZNF891A8MT65 544 aaPredicted RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 GOLGA8RI6L899 631 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 K7ENP7 123 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 DSCR3O14972 297 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 ERLIN1O75477 346 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 SNRNP200O75643 2136 aaKnown RBP13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 NUDT17P0C025 328 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 SLC35G6P0C7Q6 338 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 C1GALT1C1LP0DN25 315 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 PYGBP11216 843 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 MTHFD2P13995 350 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 BCL6P41182 706 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 AGTR2P50052 363 aa13.38□□□□□ -0.27
GTF3C3-206ENST00000448539 EMP3P54852 163 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms