RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 HEMK1Q9Y5R4 338 aaPredicted RBP12.14□□□□□ -0.47
PRPF40A-203ENST00000448428 KALRNO60229 2985 aa12.14□□□□□ -0.47
PRPF40A-203ENST00000448428 FEZF1A0PJY2 475 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 VSTM2BA6NLU5 285 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 KIF2AO00139 706 aaPredicted RBP12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 TXNDC9O14530 226 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 PHGDHO43175 533 aaKnown RBP12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 FOXS1O43638 330 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 LCMT2O60294 686 aaKnown RBP12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 CDH1P12830 882 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 RPS15AP62244 130 aaKnown RBP12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 SNRPNP63162 240 aaKnown RBP12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 GRTP1Q5TC63 336 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 GARNL3Q5VVW2 1013 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 ASB18Q6ZVZ8 466 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 VN1R4Q7Z5H5 301 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 SPATA6LQ8N4H0 392 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 MNS1Q8NEH6 495 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 ABHD11Q8NFV4 315 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 OR4K1Q8NGD4 311 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 ATL1Q8WXF7 558 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 TM4SF19Q96DZ7 209 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 TSPAN17Q96FV3 270 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 MACROD1Q9BQ69 325 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 SLC25A23Q9BV35 468 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 UNKQ9C0B0 810 aaKnown RBP12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 DERL2Q9GZP9 239 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 SOX17Q9H6I2 414 aaPredicted RBP12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 MLXIPLQ9NP71 852 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 P4HTMQ9NXG6 502 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 CTNNAL1Q9UBT7 734 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 CDC14AQ9UNH5 594 aa12.13□□□□□ -0.47
PRPF40A-203ENST00000448428 CTAGE15A4D2H0 777 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 A6NL46 340 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 MASP2O00187 686 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 PEX12O00623 359 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 CEACAM4O75871 244 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 CTAGE8P0CG41 777 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 CCDC166P0CW27 439 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 STMN1P16949 149 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 FBLP22087 321 aaKnown RBP12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 MMP11P24347 488 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 STX2P32856 288 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 SPRP35270 261 aaPredicted RBP12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 SLC26A3P40879 764 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 BCL6P41182 706 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 RRADP55042 308 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 CDKL1Q00532 357 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 OCA2Q04671 838 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 EFTUD2Q15029 972 aaKnown RBP eCLIP12.12□□□□□ -0.472e-7■■■■□ 22.5
PRPF40A-203ENST00000448428 TSNQ15631 228 aaKnown RBP12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 VWA2Q5GFL6 755 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 COLEC12Q5KU26 742 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 CTAGE6Q86UF2 777 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 LAPTM4BQ86VI4 370 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 CTAGE4Q8IX94 777 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 KIF18AQ8NI77 898 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 STT3BQ8TCJ2 826 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 THAP11Q96EK4 314 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 MVB12AQ96EY5 273 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 ZNF282Q9UDV7 671 aaPredicted RBP12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 MRPS2Q9Y399 296 aaKnown RBP12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 OARD1Q9Y530 152 aa12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 PCDHGA9Q9Y5G4 932 aaKnown RBP12.12□□□□□ -0.47
PRPF40A-203ENST00000448428 DOCK10Q96BY6 2186 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 IGLV3-12A0A075B6K2 115 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 A0A0A6YYC8 382 aaPredicted RBP12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 PYCARD-AS1I3L0S3 204 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 I3L1I5 382 aaPredicted RBP12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 J3QKU1 62 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 FFAR3O14843 346 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 GPR42O15529 346 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 ANXA5P08758 320 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 ZGLP1P0C6A0 271 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 GRK3P35626 688 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 GMPRP36959 345 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 CCR8P51685 355 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 PGDP52209 483 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 RAB10P61026 200 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 MEF2AQ02078 507 aaPredicted RBP12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 KLC1Q07866 573 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 DSG2Q14126 1118 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 FAM53BQ14153 422 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 CSHL1Q14406 222 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 ZKSCAN8Q15776 578 aaPredicted RBP12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 NDUFA9Q16795 377 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 C18orf21Q32NC0 220 aaPredicted RBP12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 GLE1Q53GS7 698 aaKnown RBP12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 DCAF10Q5QP82 559 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 CATSPEREQ5SY80 951 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 UBAP2Q5T6F2 1119 aaKnown RBP12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 ATG14Q6ZNE5 492 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 ADAMTSL2Q86TH1 951 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 THOC6Q86W42 341 aaKnown RBP12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 PRSS58Q8IYP2 241 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 AMER3Q8N944 861 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 MFSD9Q8NBP5 474 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 FDCSPQ8NFU4 85 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 SLC5A11Q8WWX8 675 aa12.11□□□□□ -0.47
PRPF40A-203ENST00000448428 IFT81Q8WYA0 676 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms