RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 PTPRAP18433 802 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 KELP23276 732 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 PSMA1P25786 263 aaKnown RBP9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF33BQ06732 778 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 LIPIQ6XZB0 460 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 CALHM3Q86XJ0 350 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 SLC34A3Q8N130 599 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 KLHL6Q8WZ60 621 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 ST8SIA4Q92187 359 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 FUBP1Q96AE4 644 aaKnown RBP9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 DPCDQ9BVM2 203 aaPredicted RBP9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 RNF19AQ9NV58 838 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 SEC14L5O43304 696 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 MAP2K6P52564 334 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 BAMBIQ13145 260 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 MRNIPQ6NTE8 343 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 EIF3MQ7L2H7 374 aaKnown RBP9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 GPAT4Q86UL3 456 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 CPA6Q8N4T0 437 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 KRTCAP2Q8N6L1 136 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 LINC00469Q8N7U9 141 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 FAM181AQ8N9Y4 354 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 OR8K5Q8NH50 307 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 HERVK_113Q902F9 699 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 EMID1Q96A84 441 aaPredicted RBP9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 ULBP1Q9BZM6 244 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 DERL2Q9GZP9 239 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 CLEC4MQ9H2X3 399 aaPredicted RBP9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 RDH8Q9NYR8 311 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 PGAP2Q9UHJ9 254 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 IQCMA0A1B0GVH7 501 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 YJEFN3A6XGL0 299 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 M0R129 80 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 GABRDO14764 452 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 PI15O43692 258 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 MAFKO60675 156 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 CDRT1O95170 752 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 SLC2A2P11168 524 aaPredicted RBP9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 CCR1P32246 355 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 ABHD18Q0P651 414 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 SULF1Q8IWU6 871 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 GPALPP1Q8IXQ4 340 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 TMEM132CQ8N3T6 1108 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 ATP6V1C2Q8NEY4 427 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 EVPLQ92817 2033 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF382Q96SR6 550 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 FDXACB1Q9BRP7 624 aaPredicted RBP9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 GABARAPL3Q9BY60 117 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 DUSP16Q9BY84 665 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 CXCL16Q9H2A7 254 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 MIXL1Q9H2W2 232 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 POPDC3Q9HBV1 291 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 FAM105AQ9NUU6 356 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 RPS6KA6Q9UK32 745 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 NDRG2Q9UN36 371 aaKnown RBP9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 ASB1Q9Y576 335 aa9.13□□□□□ -0.95
SYNPO2-204ENST00000448416 NUP214P35658 2090 aaPredicted RBP9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 ZBTB42B2RXF5 422 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 IFNA7P01567 189 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 SOX3P41225 446 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 INPP1P49441 399 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 RABGGTBP53611 331 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 RPA4Q13156 261 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF284Q2VY69 593 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 OR4F3Q6IEY1 312 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 TRIM69Q86WT6 500 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 ADGRG3Q86Y34 549 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 RBPMSQ93062 196 aaKnown RBP9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 UPRTQ96BW1 309 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 B3GALT6Q96L58 329 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 PPP3R2Q96LZ3 170 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 CPPED1Q9BRF8 314 aaPredicted RBP9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 CCM2Q9BSQ5 444 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 AARSD1Q9BTE6 412 aaKnown RBP9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 SLC39A8Q9C0K1 460 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 CRISPLD1Q9H336 500 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 INMT-MINDY4F8WBC2 141 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 ESR1P03372 595 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 COL6A1P12109 1028 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 GZMMP51124 257 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 SUOXP51687 545 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 CLDN20P56880 219 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 GNA13Q14344 377 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 PTPRCAPQ14761 206 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 ABRAXAS2Q15018 415 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 DDI2Q5TDH0 399 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 ANKRD46Q86W74 232 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 DUSP18Q8NEJ0 188 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 EDEM1Q92611 657 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 SIPA1Q96FS4 1042 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 EXOC2Q96KP1 924 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 MED10Q9BTT4 135 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 FARSBQ9NSD9 589 aaKnown RBP9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 ZNF226Q9NYT6 803 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 TAS2R13Q9NYV9 303 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 PCDH17O14917 1159 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 LYRM1O43325 122 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 SLC43A1O75387 559 aa9.12□□□□□ -0.95
SYNPO2-204ENST00000448416 B3GALNT1O75752 331 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms