RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 SHANK1Q9Y566 2161 aa16.84■□□□□ 0.29
DDX56-207ENST00000448192 A0A0A6YYC8 382 aaPredicted RBP16.83■□□□□ 0.28
DDX56-207ENST00000448192 I3L1I5 382 aaPredicted RBP16.83■□□□□ 0.28
DDX56-207ENST00000448192 SLC16A5O15375 505 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 GNLYP22749 145 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 HRH2P25021 359 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 PDIA2Q13087 525 aaKnown RBP16.83■□□□□ 0.28
DDX56-207ENST00000448192 PHKG1Q16816 387 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 STEAP4Q687X5 459 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 IGFL3Q6UXB1 125 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 C17orf64Q86WR6 236 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 ZADH2Q8N4Q0 377 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 GALNT11Q8NCW6 608 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 C8orf44Q96CB5 159 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 DRC3Q9H069 523 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 ILKAPQ9H0C8 392 aaPredicted RBP16.83■□□□□ 0.28
DDX56-207ENST00000448192 ARL15Q9NXU5 204 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 CORO1CQ9ULV4 474 aaPredicted RBP16.83■□□□□ 0.28
DDX56-207ENST00000448192 SH2B3Q9UQQ2 575 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 VWA7Q9Y334 891 aa16.83■□□□□ 0.28
DDX56-207ENST00000448192 IGLV3-12A0A075B6K2 115 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 MAP2K7O14733 419 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 FOXS1O43638 330 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 TSPAN12O95859 305 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 ACPPP15309 386 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 SAT1P21673 171 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 SLC26A3P40879 764 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 RPL21P46778 160 aaKnown RBP16.82■□□□□ 0.28
DDX56-207ENST00000448192 EMP2P54851 167 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 RPS15AP62244 130 aaKnown RBP16.82■□□□□ 0.28
DDX56-207ENST00000448192 MRPS25P82663 173 aaKnown RBP16.82■□□□□ 0.28
DDX56-207ENST00000448192 NDUFA9Q16795 377 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 AGAP7PQ5VUJ5 663 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 FAM45BPQ6NSW5 357 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 IQCKQ8N0W5 287 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 FAM26EQ8N5C1 309 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 AMER3Q8N944 861 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 FBXO36Q8NEA4 188 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 FAM45AQ8TCE6 357 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 THOC3Q96J01 351 aaKnown RBP16.82■□□□□ 0.28
DDX56-207ENST00000448192 AGAP4Q96P64 663 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 OLFM1Q99784 485 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 LHPPQ9H008 270 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 ZNF160Q9HCG1 818 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 ZFATQ9P243 1243 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 RNF14Q9UBS8 474 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 SNX24Q9Y343 169 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 DOPEY2Q9Y3R5 2298 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 SCN3AQ9NY46 2000 aa16.82■□□□□ 0.28
DDX56-207ENST00000448192 PTPN13Q12923 2485 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 FEZF1A0PJY2 475 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 IDSB3KWA1 339 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 FANCGO15287 622 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 HEXBP07686 556 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 FDXRP22570 491 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 CCND1P24385 295 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 CXCR2P25025 360 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 AVPR1BP47901 424 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 CSNK1G2P78368 415 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 SRSF1Q07955 248 aaKnown RBP eCLIP16.81■□□□□ 0.28
DDX56-207ENST00000448192 MGAT5Q09328 741 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 FASTKD3Q14CZ7 662 aaKnown RBP16.81■□□□□ 0.28
DDX56-207ENST00000448192 SYT16Q17RD7 645 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 FAAH2Q6GMR7 532 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 ARHGEF39Q8N4T4 335 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 CISD2Q8N5K1 135 aaKnown RBP16.81■□□□□ 0.28
DDX56-207ENST00000448192 OR9A4Q8NGU2 314 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 C19orf60Q96EN9 201 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 MACROD1Q9BQ69 325 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 SGPP1Q9BX95 441 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 TRIM54Q9BYV2 358 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 MKKSQ9NPJ1 570 aaPredicted RBP16.81■□□□□ 0.28
DDX56-207ENST00000448192 C14orf105Q9NVL8 296 aa16.81■□□□□ 0.28
DDX56-207ENST00000448192 MRPS2Q9Y399 296 aaKnown RBP16.81■□□□□ 0.28
DDX56-207ENST00000448192 KCNE1BA0A087WTH5 132 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 CLEC18AA5D8T8 446 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 TP73O15350 636 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 HPP00738 406 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 CDH1P12830 882 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 NPPBP16860 134 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 VARSP26640 1264 aaKnown RBP16.8■□□□□ 0.28
DDX56-207ENST00000448192 GRK3P35626 688 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 MAT1AQ00266 395 aaKnown RBP16.8■□□□□ 0.28
DDX56-207ENST00000448192 EEF1A2Q05639 463 aaKnown RBP16.8■□□□□ 0.28
DDX56-207ENST00000448192 Q0VFX4 171 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 FAM53BQ14153 422 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 FRG1Q14331 258 aaKnown RBP16.8■□□□□ 0.28
DDX56-207ENST00000448192 ATG9BQ674R7 924 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 CAPN13Q6MZZ7 669 aaPredicted RBP16.8■□□□□ 0.28
DDX56-207ENST00000448192 LCTLQ6UWM7 567 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 CLEC18BQ6UXF7 455 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 VN1R4Q7Z5H5 301 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 STRA8Q7Z7C7 330 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 CLEC18CQ8NCF0 446 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 PYCR2Q96C36 320 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 SNRNP40Q96DI7 357 aaKnown RBP16.8■□□□□ 0.28
DDX56-207ENST00000448192 SLC29A3Q9BZD2 475 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 PSAT1Q9Y617 370 aa16.8■□□□□ 0.28
DDX56-207ENST00000448192 RP1L1Q8IWN7 2480 aaPredicted RBP16.79■□□□□ 0.28
DDX56-207ENST00000448192 NSG1A0A0A6YYJ2 146 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms