RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 FAM92BQ6ZTR7 304 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 ZNF740Q8NDX6 193 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 OR7G3Q8NG95 312 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 IFI44Q8TCB0 444 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 SELENOMQ8WWX9 145 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 ZUFSPQ96AP4 578 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 MTFMTQ96DP5 389 aaKnown RBP18.76■□□□□ 0.59
SGCE-207ENST00000447873 PPM1MQ96MI6 270 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 TGM7Q96PF1 710 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 CCT7Q99832 543 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 PITHD1Q9GZP4 211 aaPredicted RBP18.76■□□□□ 0.59
SGCE-207ENST00000447873 KLHL25Q9H0H3 589 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 TUBB1Q9H4B7 451 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 KCNK13Q9HB14 408 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 FARSBQ9NSD9 589 aaKnown RBP18.76■□□□□ 0.59
SGCE-207ENST00000447873 FTSJ1Q9UET6 329 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 EPHA6Q9UF33 1036 aa18.76■□□□□ 0.59
SGCE-207ENST00000447873 COL5A1P20908 1838 aaPredicted RBP18.75■□□□□ 0.59
SGCE-207ENST00000447873 EP300Q09472 2414 aaPredicted RBP18.75■□□□□ 0.59
SGCE-207ENST00000447873 FEZF1A0PJY2 475 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 TNFSF14O43557 240 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 PDYNP01213 254 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 LINC00032P0C843 101 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 CKMT2P17540 419 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 CD1CP29017 333 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 LSSP48449 732 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 HTR6P50406 440 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 NEK2P51955 445 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 ABRAXAS2Q15018 415 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 USP53Q70EK8 1073 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 PLXDC1Q8IUK5 500 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 NAXDQ8IW45 347 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 LAS2Q8IYD9 372 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 TBC1D19Q8N5T2 526 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 WDR20Q8TBZ3 569 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 USP7Q93009 1102 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 HBEGFQ99075 208 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 PLCD4Q9BRC7 762 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 TMEM120AQ9BXJ8 343 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 SEMA6CQ9H3T2 930 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 MEAF6Q9HAF1 191 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 ANKMY1Q9P2S6 941 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 PTGDR2Q9Y5Y4 395 aa18.75■□□□□ 0.59
SGCE-207ENST00000447873 PROB1E7EW31 1015 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 OR1F1O43749 312 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 PVRP15151 417 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 IDH3AP50213 366 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 INHBCP55103 352 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 GFERP55789 205 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 ZNF33BQ06732 778 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 DDX39BQ13838 428 aaKnown RBP18.74■□□□□ 0.59
SGCE-207ENST00000447873 SLC9B1Q4ZJI4 515 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 C10orf62Q5T681 223 aaPredicted RBP18.74■□□□□ 0.59
SGCE-207ENST00000447873 FIGLAQ6QHK4 219 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 WDR74Q6RFH5 385 aaPredicted RBP18.74■□□□□ 0.59
SGCE-207ENST00000447873 PAQR7Q86WK9 346 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 MAP3K3Q99759 626 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 EBF4Q9BQW3 602 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 NT5DC2Q9H857 520 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 C1GALT1Q9NS00 363 aa18.74■□□□□ 0.59
SGCE-207ENST00000447873 APOBEC2Q9Y235 224 aaKnown RBP18.74■□□□□ 0.59
SGCE-207ENST00000447873 GOLGA8QA0A0J9YX86 632 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 TRBC2A0A5B9 178 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 OR2A25A4D2G3 310 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 GOLGA8OA6NCC3 632 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 GOLGA8NF8WBI6 632 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 HAT1O14929 419 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 SH3BP5O60239 455 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 NRP2O60462 931 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 RPLP0P05388 317 aaKnown RBP18.73■□□□□ 0.59
SGCE-207ENST00000447873 FCRL6Q6DN72 434 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 RNF165Q6ZSG1 346 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 PLD3Q8IV08 490 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 HUS1BQ8NHY5 278 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 BAHD1Q8TBE0 780 aaPredicted RBP18.73■□□□□ 0.59
SGCE-207ENST00000447873 C10orf82Q8WW14 230 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 C3orf30Q96M34 536 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 RILPQ96NA2 401 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 CD180Q99467 661 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 MTERF1Q99551 399 aaKnown RBP18.73■□□□□ 0.59
SGCE-207ENST00000447873 WDR55Q9H6Y2 383 aaPredicted RBP18.73■□□□□ 0.59
SGCE-207ENST00000447873 KLHL3Q9UH77 587 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 KLK4Q9Y5K2 254 aa18.73■□□□□ 0.59
SGCE-207ENST00000447873 MDC1Q14676 2089 aaKnown RBP18.73■□□□□ 0.59
SGCE-207ENST00000447873 ATP6AP2A0A1C7CYW4 349 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 TLCD2A6NGC4 264 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 ANKDD1BA6NHY2 528 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 ATP6AP2O75787 350 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 ST6GAL1P15907 406 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 EPHA3P29320 983 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 CSF2RBP32927 897 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 PHEXP78562 749 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 CCL7P80098 99 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 CFHR1Q03591 330 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 IMPG1Q17R60 797 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 ADNP2Q6IQ32 1131 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 ACAD11Q709F0 780 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 TRIM46Q7Z4K8 759 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 TRAPPC9Q96Q05 1148 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 LRRN3Q9H3W5 708 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms