RNA–Protein interactions for RNA: ENST00000447246.1

LRPPRC-205, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best)

Gene LRPPRC, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-205ENST00000447246 PEX1O43933 1283 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 SRPX2O60687 465 aaPredicted RBP13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 CNOT4O95628 575 aaKnown RBP13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 AP2A1O95782 977 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 HRGP04196 525 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 ANXA5P08758 320 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 EPXP11678 715 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 PEX19P40855 299 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 SLC26A3P40879 764 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 CDKN1CP49918 316 aaPredicted RBP13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 DMTNQ08495 405 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 SLC14A2Q15849 920 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 MINDY4Q4G0A6 757 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 CPNE8Q86YQ8 564 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 KIF2BQ8N4N8 673 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 MAPK1IP1LQ8NDC0 245 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 FAM71BQ8TC56 605 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 RNASE6Q93091 150 aaKnown RBP13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 ZNF830Q96NB3 372 aaPredicted RBP13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 SECISBP2Q96T21 854 aaKnown RBP13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 YIPF4Q9BSR8 244 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 SYNPO2LQ9H987 977 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 LUC7LQ9NQ29 371 aaKnown RBP13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 HACD3Q9P035 362 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 ADGRE2Q9UHX3 823 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 CDC14AQ9UNH5 594 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 HEY1Q9Y5J3 304 aa13.57□□□□□ -0.24
LRPPRC-205ENST00000447246 LOC285095A0A1B0GVY8 99 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 TUBAL3A6NHL2 446 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 FAM166BA8MTA8 275 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 PRPF4O43172 522 aaKnown RBP eCLIP13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 DNAJB6O75190 326 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 H2AFZP0C0S5 128 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 PRSS56P0CW18 603 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 CYB561P49447 251 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 SNRPNP63162 240 aaKnown RBP13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 XIAPP98170 497 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 HKDC1Q2TB90 917 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 PRTGQ2VWP7 1150 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 CATSPEREQ5SY80 951 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 PRSS57Q6UWY2 283 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 H2AFVQ71UI9 128 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 ANKRD37Q7Z713 158 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 CCDC170Q8IYT3 715 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 C16orf52Q8NHV5 167 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 KIAA1191Q96A73 305 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 SMC6Q96SB8 1091 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 CYTH2Q99418 400 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 MIPEPQ99797 713 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 VPS37BQ9H9H4 285 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 MMP25Q9NPA2 562 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 SPTLC3Q9NUV7 552 aa13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 RUVBL1Q9Y265 456 aaKnown RBP13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 KLF13Q9Y2Y9 288 aaPredicted RBP13.56□□□□□ -0.24
LRPPRC-205ENST00000447246 A0A0A6YYK5 440 aaPredicted RBP13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 MBD3L4A6NDZ8 208 aaPredicted RBP13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 MBD3L5A6NJ08 208 aaPredicted RBP13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 CLDN4O14493 209 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 S1PR4O95977 384 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 TMEM253P0C7T8 217 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 CD9P21926 228 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 BMP5P22003 454 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 ASCL1P50553 236 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 CSE1LP55060 971 aaKnown RBP13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 SRSF2Q01130 221 aaKnown RBP13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 EXT1Q16394 746 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 PAPD4Q6PIY7 484 aaKnown RBP13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 RNF44Q7L0R7 432 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 IPMKQ8NFU5 416 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 OR13C4Q8NGS5 318 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 M1APQ8TC57 530 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 CTNNBL1Q8WYA6 563 aaPredicted RBP13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 MRGPRX2Q96LB1 330 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 ZNF670Q9BS34 389 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 CNPPD1Q9BV87 410 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 C19orf24Q9BVV8 132 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 PACSIN1Q9BY11 444 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 TRMT1Q9NXH9 659 aaKnown RBP13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 ALKBH4Q9NXW9 302 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 UVRAGQ9P2Y5 699 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 C19orf25Q9UFG5 118 aaPredicted RBP13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 FAM153AQ9UHL3 310 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 INTUQ9ULD6 942 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 ABCA1O95477 2261 aa13.55□□□□□ -0.24
LRPPRC-205ENST00000447246 A0A0U1RQJ8 604 aa13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 H0YGG7 62 aa13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 FOXS1O43638 330 aa13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 NFKB1P19838 968 aa13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 CD68P34810 354 aaPredicted RBP13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 TAS2R50P59544 299 aa13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 ARF3P61204 181 aaPredicted RBP13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 SLC1A5Q15758 541 aa13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 C1orf185Q5T7R7 199 aa13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 NPNTQ6UXI9 565 aa13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 RPS19BP1Q86WX3 136 aaKnown RBP13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 SLC13A5Q86YT5 568 aaPredicted RBP13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 ZFP62Q8NB50 900 aaPredicted RBP13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 SPC24Q8NBT2 197 aa13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 KCTD6Q8NC69 237 aa13.54□□□□□ -0.24
LRPPRC-205ENST00000447246 ELMO1Q92556 727 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms