RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	MALT1	Q9UDY8	824 aa		12.16	□□□□□ -0.46
DDR1-238	ENST00000446312		A0A1W2PQ72	361 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	EVPLL	A8MZ36	301 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	CLIC1	O00299	241 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	TLL1	O43897	1013 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	STK16	O75716	305 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	STATH	P02808	62 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	CSF2	P04141	144 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	SSTR4	P31391	388 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	ALDH7A1	P49419	539 aa	Known RBP	12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	ARF5	P84085	180 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	GRSF1	Q12849	480 aa	Known RBP eCLIP	12.15	□□□□□ -0.46	1e-5	■□□□□ 8.9
DDR1-238	ENST00000446312	TCEA2	Q15560	299 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	FAM110C	Q1W6H9	321 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	PTCHD3	Q3KNS1	767 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	TEX26	Q8N6G2	289 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	PPP3R2	Q96LZ3	170 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	ZNF641	Q96N77	438 aa	Predicted RBP	12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	NRTN	Q99748	197 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	TMEM9	Q9P0T7	183 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	TSC2	P49815	1807 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	DICER1	Q9UPY3	1922 aa	Known RBP	12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	YY2	O15391	372 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	HOXC11	O43248	304 aa	Predicted RBP	12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	LAMP1	P11279	417 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	DNAJB1	P25685	340 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	ATP5C1	P36542	298 aa	Known RBP	12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	CDH18	Q13634	790 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	LDLRAD1	Q5T700	205 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	MFSD4A	Q8N468	514 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	LINC00469	Q8N7U9	141 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	PAPD5	Q8NDF8	572 aa	Known RBP	12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	SCAMP4	Q969E2	229 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	NUSAP1	Q9BXS6	441 aa	Known RBP	12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	MTG2	Q9H4K7	406 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	REEP1	Q9H902	201 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	ACOT13	Q9NPJ3	140 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	AKIP1	Q9NQ31	210 aa		12.15	□□□□□ -0.46
DDR1-238	ENST00000446312	CASP8AP2	Q9UKL3	1982 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	TYW5	A2RUC4	315 aa	Known RBP	12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	MTMR11	A4FU01	709 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	SYNDIG1L	A6NDD5	238 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312		M0QZQ0	153 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	ZNF701	M0R085	212 aa	Predicted RBP	12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	COCH	O43405	550 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	HOXD8	P13378	290 aa	Predicted RBP	12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	CTGF	P29279	349 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	RPS26	P62854	115 aa	Known RBP	12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	POU6F2	P78424	691 aa	Predicted RBP	12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	ZNF852	Q6ZMS4	543 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	TMEM132C	Q8N3T6	1108 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	STX19	Q8N4C7	294 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	OR6Q1	Q8NGQ2	317 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	C1orf74	Q96LT6	269 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	ZIC5	Q96T25	663 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	ADGRE3	Q9BY15	652 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	MRO	Q9BYG7	248 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	IL26	Q9NPH9	171 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	OLA1	Q9NTK5	396 aa	Known RBP	12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	EHD3	Q9NZN3	535 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	TPRKB	Q9Y3C4	175 aa		12.15	□□□□□ -0.47
DDR1-238	ENST00000446312	GREB1	Q4ZG55	1949 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	GNG14	A0A1W2PPG7	69 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	PABPN1L	A6NDY0	278 aa	Known RBP	12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	STX16	O14662	325 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	KCNK2	O95069	426 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	CCND3	P30281	292 aa	Predicted RBP	12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	SLC26A3	P40879	764 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	CSK	P41240	450 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	SLC11A2	P49281	568 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	RGS4	P49798	205 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	ZNF157	P51786	506 aa	Predicted RBP	12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	CCDC85B	Q15834	202 aa	Predicted RBP	12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	TIGD6	Q17RP2	521 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	LEXM	Q3ZCV2	418 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	ZMAT1	Q5H9K5	638 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	SPOUT1	Q5T280	376 aa	Known RBP	12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	KIAA1841	Q6NSI8	718 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	TRAF7	Q6Q0C0	670 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	UBE2R2	Q712K3	238 aa	Predicted RBP	12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	SLC51B	Q86UW2	128 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	CADM2	Q8N3J6	435 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	CEP19	Q96LK0	163 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	NEDD4L	Q96PU5	975 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	FEV	Q99581	238 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	TTYH2	Q9BSA4	534 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	ZSCAN5A	Q9BUG6	496 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	TRIM62	Q9BVG3	475 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	ACAT2	Q9BWD1	397 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	HOXD1	Q9GZZ0	328 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	ZFYVE1	Q9HBF4	777 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	TIGAR	Q9NQ88	270 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	ZNF639	Q9UID6	485 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	PRKAB1	Q9Y478	270 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	MAP4K5	Q9Y4K4	846 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	DOCK6	Q96HP0	2047 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312		M0QX08	132 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	CCNK	O75909	580 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	SDC1	P18827	310 aa		12.14	□□□□□ -0.47
DDR1-238	ENST00000446312	ITIH1	P19827	911 aa		12.14	□□□□□ -0.47

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