RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 CHMP6Q96FZ7 201 aa14.5□□□□□ -0.09
CCNE1-203ENST00000444983 SLC29A3Q9BZD2 475 aa14.5□□□□□ -0.09
CCNE1-203ENST00000444983 TIMM22Q9Y584 194 aa14.5□□□□□ -0.09
CCNE1-203ENST00000444983 PCDHGA1Q9Y5H4 931 aa14.5□□□□□ -0.09
CCNE1-203ENST00000444983 SLC9B1P1A6NJY1 282 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 SRRM3A6NNA2 597 aaPredicted RBP14.49□□□□□ -0.09
CCNE1-203ENST00000444983 GIPC1O14908 333 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 LCMT2O60294 686 aaKnown RBP14.49□□□□□ -0.09
CCNE1-203ENST00000444983 CTSVO60911 334 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 TGDSO95455 350 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 ANKRD34CP0C6C1 535 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 THRAP10827 490 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 CSRP1P21291 193 aaKnown RBP14.49□□□□□ -0.09
CCNE1-203ENST00000444983 CDH3P22223 829 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 CXCR2P25025 360 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 SEC24CP53992 1094 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 ZRSR2Q15696 482 aaKnown RBP14.49□□□□□ -0.09
CCNE1-203ENST00000444983 CPSF6Q16630 551 aaKnown RBP eCLIP14.49□□□□□ -0.09
CCNE1-203ENST00000444983 PAGE2BQ5JRK9 111 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 TMIGD1Q6UXZ0 262 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 SLITRK4Q8IW52 837 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 KIRREL3Q8IZU9 778 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 ANKRD53Q8N9V6 530 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 OR7G3Q8NG95 312 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 WDR48Q8TAF3 677 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 AGR3Q8TD06 166 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 KLHL6Q8WZ60 621 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 AIF1LQ9BQI0 150 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 RHBGQ9H310 441 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 TUBB1Q9H4B7 451 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 FAM60AQ9NP50 221 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 FGFR1OP2Q9NVK5 253 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 PCDHGA11Q9Y5H2 935 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 ADAMTS20P59510 1910 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 IGHV5-10-1A0A0J9YXX1 117 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 TRBC2A0A5B9 178 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 SERTM1A2A2V5 107 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 D6RAR5 112 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 HAT1O14929 419 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 ZBTB11O95625 1053 aaPredicted RBP14.49□□□□□ -0.09
CCNE1-203ENST00000444983 EZRP15311 586 aaKnown RBP14.49□□□□□ -0.09
CCNE1-203ENST00000444983 SERPINB3P29508 390 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 SCTRP47872 440 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 GABRA4P48169 554 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 PDX1P52945 283 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 ZFP36L1Q07352 338 aaKnown RBP14.49□□□□□ -0.09
CCNE1-203ENST00000444983 TCHHL1Q5QJ38 904 aaPredicted RBP14.49□□□□□ -0.09
CCNE1-203ENST00000444983 ADNP2Q6IQ32 1131 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 CGB2Q6NT52 195 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 RNF44Q7L0R7 432 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 VN1R5Q7Z5H4 357 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 CRLF3Q8IUI8 442 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 HOMEZQ8IX15 550 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 C19orf47Q8N9M1 422 aaKnown RBP14.49□□□□□ -0.09
CCNE1-203ENST00000444983 TCTN2Q96GX1 697 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 SLC41A2Q96JW4 573 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 OR2A5Q96R48 311 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 GFM1Q96RP9 751 aaKnown RBP14.49□□□□□ -0.09
CCNE1-203ENST00000444983 KLHL25Q9H0H3 589 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 BTRCQ9Y297 605 aa14.49□□□□□ -0.09
CCNE1-203ENST00000444983 FEZF1A0PJY2 475 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 GMNCA6NCL1 334 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 HGSO14964 777 aaPredicted RBP14.48□□□□□ -0.09
CCNE1-203ENST00000444983 HCRTR1O43613 425 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 TBX6O95947 436 aaPredicted RBP14.48□□□□□ -0.09
CCNE1-203ENST00000444983 JUNP05412 331 aaKnown RBP14.48□□□□□ -0.09
CCNE1-203ENST00000444983 VIMP08670 466 aaKnown RBP14.48□□□□□ -0.09
CCNE1-203ENST00000444983 ALOX15P16050 662 aaPredicted RBP14.48□□□□□ -0.09
CCNE1-203ENST00000444983 ARL1P40616 181 aaPredicted RBP14.48□□□□□ -0.09
CCNE1-203ENST00000444983 HK2P52789 917 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 E2F1Q01094 437 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 ZNF33BQ06732 778 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 C10orf62Q5T681 223 aaPredicted RBP14.48□□□□□ -0.09
CCNE1-203ENST00000444983 CACHD1Q5VU97 1274 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 FRG2Q64ET8 278 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 MED27Q6P2C8 311 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 MAVSQ7Z434 540 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 KMT5CQ86Y97 462 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 MYLK4Q86YV6 388 aaPredicted RBP14.48□□□□□ -0.09
CCNE1-203ENST00000444983 PLD3Q8IV08 490 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 KRT78Q8N1N4 520 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 DNAJC22Q8N4W6 341 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 DEFB124Q8NES8 71 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 UBE2E3Q969T4 207 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 SEC16BQ96JE7 1060 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 FRG2BQ96QU4 278 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 ZNF768Q9H5H4 540 aaKnown RBP14.48□□□□□ -0.09
CCNE1-203ENST00000444983 FARSBQ9NSD9 589 aaKnown RBP14.48□□□□□ -0.09
CCNE1-203ENST00000444983 MARCOQ9UEW3 520 aaPredicted RBP14.48□□□□□ -0.09
CCNE1-203ENST00000444983 PCDHGA4Q9Y5G9 962 aa14.48□□□□□ -0.09
CCNE1-203ENST00000444983 MANBAO00462 879 aa14.47□□□□□ -0.09
CCNE1-203ENST00000444983 FFAR3O14843 346 aa14.47□□□□□ -0.09
CCNE1-203ENST00000444983 GPR42O15529 346 aa14.47□□□□□ -0.09
CCNE1-203ENST00000444983 ULK1O75385 1050 aa14.47□□□□□ -0.09
CCNE1-203ENST00000444983 RFPL3O75679 317 aa14.47□□□□□ -0.09
CCNE1-203ENST00000444983 MSL3P1P0C860 447 aa14.47□□□□□ -0.09
CCNE1-203ENST00000444983 NELFEP18615 380 aaKnown RBP14.47□□□□□ -0.09
CCNE1-203ENST00000444983 AHRP35869 848 aa14.47□□□□□ -0.09
CCNE1-203ENST00000444983 BCL6P41182 706 aa14.47□□□□□ -0.09
CCNE1-203ENST00000444983 PIK3CBP42338 1070 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms