RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 PRSS23O95084 383 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 ETFAP13804 333 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 ACPPP15309 386 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 BPIP17213 487 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 CD40LGP29965 261 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 OR2B6P58173 313 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 NKX3-2P78367 333 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 GRIK2Q13002 908 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 DPY19L1Q2PZI1 675 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 FAM131AQ6UXB0 335 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 CASP12Q6UXS9 341 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 TMEM173Q86WV6 379 aaPredicted RBP11.28□□□□□ -0.6
HCFC1-203ENST00000444191 MEX3DQ86XN8 651 aaKnown RBP11.28□□□□□ -0.6
HCFC1-203ENST00000444191 SLC5A8Q8N695 610 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 RHBDF1Q96CC6 855 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 C1GALT1C1Q96EU7 318 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 TTYH2Q9BSA4 534 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 RNF38Q9H0F5 515 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 OR51B5Q9H339 312 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 HEBP1Q9NRV9 189 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 ILVBLA1L0T0 632 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 OR6C75A6NL08 312 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 SCAMP1O15126 338 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 TAPBPO15533 448 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 STC2O76061 302 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 HTR1AP08908 422 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 GABRR2P28476 465 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 HOXC13P31276 330 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 PPP2R2BQ00005 443 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 CD83Q01151 205 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 ZFP69Q49AA0 526 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 SETMARQ53H47 684 aaPredicted RBP11.28□□□□□ -0.6
HCFC1-203ENST00000444191 RSPO2Q6UXX9 243 aaPredicted RBP11.28□□□□□ -0.6
HCFC1-203ENST00000444191 ALDH16A1Q8IZ83 802 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 CMTM8Q8IZV2 173 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 C11orf65Q8NCR3 313 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 NFKBIDQ8NI38 313 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 ZNF675Q8TD23 568 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 ACOT13Q9NPJ3 140 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 CFAP97Q9P2B7 532 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 VPS29Q9UBQ0 182 aa11.28□□□□□ -0.6
HCFC1-203ENST00000444191 BRCA2P51587 3418 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 SLC35F4A4IF30 521 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 TSPAN12O95859 305 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 NPPAP01160 153 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 EBLN1P0CF75 366 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 PTGER1P34995 402 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 LIPAP38571 399 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 RFX3P48380 749 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 CLK3P49761 638 aaKnown RBP11.27□□□□□ -0.6
HCFC1-203ENST00000444191 PRKCZQ05513 592 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 ACOX1Q15067 660 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 HIST2H2ACQ16777 129 aaPredicted RBP11.27□□□□□ -0.6
HCFC1-203ENST00000444191 PYDC2Q56P42 97 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 USP45Q70EL2 814 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 RIMKLAQ8IXN7 391 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 RAET1EQ8TD07 263 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 DNASE1L2Q92874 299 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 ZNF221Q9UK13 617 aa11.27□□□□□ -0.6
HCFC1-203ENST00000444191 FAM227AF5H4B4 570 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 J3KTA2 159 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 UPK1AO00322 258 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 MYL12BO14950 172 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 ZNF623O75123 536 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 SULT1C4O75897 302 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 FHP07954 510 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 PRPS2P11908 318 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 CLCN7P51798 805 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 ARF5P84085 180 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 RNASE12Q5GAN4 147 aaKnown RBP11.27□□□□□ -0.61
HCFC1-203ENST00000444191 NAGSQ8N159 534 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 DPP10Q8N608 796 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 HJURPQ8NCD3 748 aaPredicted RBP11.27□□□□□ -0.61
HCFC1-203ENST00000444191 MRPS31Q92665 395 aaKnown RBP11.27□□□□□ -0.61
HCFC1-203ENST00000444191 RAB8BQ92930 207 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 CLIP3Q96DZ5 547 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 TRNT1Q96Q11 434 aaKnown RBP11.27□□□□□ -0.61
HCFC1-203ENST00000444191 WRAP53Q9BUR4 548 aaKnown RBP11.27□□□□□ -0.61
HCFC1-203ENST00000444191 KCNH6Q9H252 994 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 TM9SF3Q9HD45 589 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 ABCB8Q9NUT2 735 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 THG1LQ9NWX6 298 aaKnown RBP11.27□□□□□ -0.61
HCFC1-203ENST00000444191 CLEC4AQ9UMR7 237 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 LAMA3Q16787 3333 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 TNFRSF21O75509 655 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 CPNE6O95741 557 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 SLC10A3P09131 477 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 IFI30P13284 250 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 HMGCLP35914 325 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 NSG1P42857 185 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 BDKRB1P46663 353 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 CRHR2Q13324 411 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 PCBP2Q15366 365 aaKnown RBP eCLIP11.27□□□□□ -0.612e-14■■■□□ 16.1
HCFC1-203ENST00000444191 DUOXA1Q1HG43 343 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 STEAP3Q658P3 488 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 ADNP2Q6IQ32 1131 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 FAM9CQ8IZT9 166 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 TEX26Q8N6G2 289 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 CELF2-AS1Q8N7Q2 184 aa11.27□□□□□ -0.61
HCFC1-203ENST00000444191 TRIB2Q92519 343 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms