RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 CD99L2Q8TCZ2 262 aa18.34■□□□□ 0.53
PAXBP1-204ENST00000443785 CYB5D2Q8WUJ1 264 aa18.34■□□□□ 0.53
PAXBP1-204ENST00000443785 Q96MT0 163 aa18.34■□□□□ 0.53
PAXBP1-204ENST00000443785 TRIT1Q9H3H1 467 aaKnown RBP18.34■□□□□ 0.53
PAXBP1-204ENST00000443785 POU2F3Q9UKI9 436 aa18.34■□□□□ 0.53
PAXBP1-204ENST00000443785 PNMA8CA0A1B0GUJ8 204 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 FAM220BPB1ANY3 271 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 KPNA5O15131 536 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 RETP07949 1114 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 SELPP16109 830 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 ACSM2AQ08AH3 577 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 ABHD18Q0P651 414 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 TUBA3CQ13748 450 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 FAM26DQ5JW98 314 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 ACSM2BQ68CK6 577 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 SHQ1Q6PI26 577 aaKnown RBP18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 OTOP2Q7RTS6 562 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 ZZZ3Q8IYH5 903 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 NELL1Q92832 810 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 TTLL2Q9BWV7 592 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 OR51E2Q9H255 320 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 ZDHHC4Q9NPG8 344 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 IL1RAPQ9NPH3 570 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 KCTD5Q9NXV2 234 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 DNMT3BQ9UBC3 853 aaKnown RBP18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 CCL26Q9Y258 94 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 TPRKBQ9Y3C4 175 aa18.33■□□□□ 0.53
PAXBP1-204ENST00000443785 PLXNA4Q9HCM2 1894 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 WBP4O75554 376 aaKnown RBP18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 ITIH1P19827 911 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 FEN1P39748 380 aaKnown RBP18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 RPS26P62854 115 aaKnown RBP18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 CAMK2GQ13555 558 aaPredicted RBP18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 VEPH1Q14D04 833 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 MAD2L1BPQ15013 274 aaPredicted RBP18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 SPATS1Q496A3 300 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 NIPAL1Q6NVV3 410 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 CALHM3Q86XJ0 350 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 NPAS4Q8IUM7 802 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 ZNF461Q8TAF7 563 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 RAET1EQ8TD07 263 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 CIDECQ96AQ7 238 aaPredicted RBP18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 ABHD8Q96I13 439 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 COPS4Q9BT78 406 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 SORBS1Q9BX66 1292 aaKnown RBP18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 TRPS1Q9UHF7 1281 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 KPNA4O00629 521 aaPredicted RBP18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 SERPINA4P29622 427 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 PDHA2P29803 388 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 NSG1P42857 185 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 LRRC74AQ0VAA2 488 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 NCCRP1Q6ZVX7 275 aaPredicted RBP18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 CHST9Q7L1S5 443 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 CACUL1Q86Y37 369 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 HJURPQ8NCD3 748 aaPredicted RBP18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 HTATIP2Q9BUP3 242 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 DCSTAMPQ9H295 470 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 BRD9Q9H8M2 597 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 ITM2BQ9Y287 266 aa18.33■□□□□ 0.52
PAXBP1-204ENST00000443785 GABRR3A8MPY1 467 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 CCNDBP1O95273 360 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 TGFB1P01137 390 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 ALOX12P18054 663 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 NPRL3Q12980 569 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 DOC2AQ14183 400 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 DGUOKQ16854 277 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 ENTHD1Q8IYW4 607 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 AADATQ8N5Z0 425 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 SLC5A8Q8N695 610 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 POC5Q8NA72 575 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 OTUB1Q96FW1 271 aaPredicted RBP18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 FAM210AQ96ND0 272 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 NIPSNAP1Q9BPW8 284 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 SAMD4AQ9UPU9 718 aaKnown RBP18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 SH3BP1Q9Y3L3 701 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 COL4A4P53420 1690 aaPredicted RBP18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 CA12O43570 354 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 SSX4O60224 188 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 ANXA4P09525 319 aaPredicted RBP18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 CRYBA2P53672 197 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 STARD3Q14849 445 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 INO80DQ53TQ3 878 aaPredicted RBP18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 HEATR4Q86WZ0 1026 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 KCNS3Q9BQ31 491 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 SGK2Q9HBY8 427 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 AKIP1Q9NQ31 210 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 USE1Q9NZ43 259 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 PRKAB1Q9Y478 270 aa18.32■□□□□ 0.52
PAXBP1-204ENST00000443785 CCDC88CQ9P219 2028 aa18.31■□□□□ 0.52
PAXBP1-204ENST00000443785 MYO1DO94832 1006 aa18.31■□□□□ 0.52
PAXBP1-204ENST00000443785 SPNP16150 400 aa18.31■□□□□ 0.52
PAXBP1-204ENST00000443785 SOAT1P35610 550 aa18.31■□□□□ 0.52
PAXBP1-204ENST00000443785 DMC1Q14565 340 aa18.31■□□□□ 0.52
PAXBP1-204ENST00000443785 CDKN3Q16667 212 aa18.31■□□□□ 0.52
PAXBP1-204ENST00000443785 DUOXA1Q1HG43 343 aa18.31■□□□□ 0.52
PAXBP1-204ENST00000443785 OLIG3Q7RTU3 272 aa18.31■□□□□ 0.52
PAXBP1-204ENST00000443785 CCDC103Q8IW40 242 aa18.31■□□□□ 0.52
PAXBP1-204ENST00000443785 OR2AP1Q8NGE2 309 aa18.31■□□□□ 0.52
PAXBP1-204ENST00000443785 DNAJC11Q9NVH1 559 aa18.31■□□□□ 0.52
PAXBP1-204ENST00000443785 MICAL3Q7RTP6 2002 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 358.3 ms