RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 TAPBPO15533 448 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 STK16O75716 305 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 WDR47O94967 919 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 TUBBP07437 444 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 RBP1P09455 135 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 PIM1P11309 404 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 NCF1P14598 390 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 GNAZP19086 355 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 WT1P19544 449 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 F8A1P23610 371 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 PTPN4P29074 926 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 DEKP35659 375 aaKnown RBP14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 GMPRP36959 345 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 KCNC1P48547 511 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 IRF9Q00978 393 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 RHDQ02161 417 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 RASA2Q15283 850 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 MUM1Q2TAK8 710 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 EMBQ6PCB8 327 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 FAM199XQ6PEV8 388 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 LCA5Q86VQ0 697 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 UBTD2Q8WUN7 234 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 STARD8Q92502 1023 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 NEIL2Q969S2 332 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 RNF31Q96EP0 1072 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 MVB12AQ96EY5 273 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 CRELD1Q96HD1 420 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 GPR78Q96P69 363 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 TMEM79Q9BSE2 394 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 DHCR7Q9UBM7 475 aaKnown RBP14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 IL17BQ9UHF5 180 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 FARSAQ9Y285 508 aaKnown RBP14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 ZZEF1O43149 2961 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 TRBC2A0A5B9 178 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 MAP2K7O14733 419 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 CREG1O75629 220 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 EIF2S1P05198 315 aaKnown RBP14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 CAPN1P07384 714 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 ALAS2P22557 587 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 CDC16Q13042 620 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 NKAIN1Q4KMZ8 207 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 METTL2BQ6P1Q9 378 aaKnown RBP14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 PRMT9Q6P2P2 845 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 NXPE4Q6UWF7 544 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 FAM198BQ6UWH4 519 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 TTLL10Q6ZVT0 673 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 LRRC70Q7Z2Q7 622 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 SYVN1Q86TM6 617 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 TDRPQ86YL5 185 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 CSNK1A1LQ8N752 337 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 MFSD9Q8NBP5 474 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 ACMSDQ8TDX5 336 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 TM4SF19Q96DZ7 209 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 TSNARE1Q96NA8 513 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 CATSPER2Q96P56 530 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 PITHD1Q9GZP4 211 aaPredicted RBP14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 STARD5Q9NSY2 213 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 DNAJC11Q9NVH1 559 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 TMCO1Q9UM00 188 aa14.35□□□□□ -0.11
CSNK1E-210ENST00000442216 SUPT3HB4E1H0 165 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 KLK8O60259 260 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 KATNA1O75449 491 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 SUPT3HO75486 399 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 RFPL1O75677 317 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 ALBP02768 609 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 ITGB2P05107 769 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 MTHFD2P13995 350 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 CXCR2P25025 360 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 AHRP35869 848 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 GDF5P43026 501 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 HSPA7P48741 367 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 FAM53BQ14153 422 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 NCF4Q15080 339 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 NDUFA9Q16795 377 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 ERCC6LQ2NKX8 1250 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 TECRLQ5HYJ1 363 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 LCN10Q6JVE6 187 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 PLD6Q8N2A8 252 aaKnown RBP14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 ARHGEF39Q8N4T4 335 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 CAMKVQ8NCB2 501 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 AENQ8WTP8 325 aaKnown RBP14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 CAVIN3Q969G5 261 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 FKBP10Q96AY3 582 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 AIF1LQ9BQI0 150 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 CD244Q9BZW8 370 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 EHD1Q9H4M9 534 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 ACTL8Q9H568 366 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 SYNPO2LQ9H987 977 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 GPN3Q9UHW5 284 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 CDC14AQ9UNH5 594 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 RUVBL1Q9Y265 456 aaKnown RBP14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 PADI2Q9Y2J8 665 aa14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 DSPP15924 2871 aaKnown RBP14.34□□□□□ -0.11
CSNK1E-210ENST00000442216 CELSR3Q9NYQ7 3312 aa14.33□□□□□ -0.11
CSNK1E-210ENST00000442216 FEZF1A0PJY2 475 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 UBXN8O00124 270 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 CLGNO14967 610 aa14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 PRPF4O43172 522 aaKnown RBP eCLIP14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 LCMT2O60294 686 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-210ENST00000442216 H2AFYO75367 372 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms