RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 PER2O15055 1255 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 CXCL10P02778 98 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 HMBSP08397 361 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 PRKACBP22694 351 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 SLC19A1P41440 591 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 HTR2BP41595 481 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 OR3A3P47888 321 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 RGS6P49758 472 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 BNC1Q01954 994 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 SMU1Q2TAY7 513 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 GTDC1Q4AE62 458 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 SPANXN4Q5MJ08 99 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 SPOUT1Q5T280 376 aaKnown RBP11.54□□□□□ -0.56
LTBR-203ENST00000441074 ARMC4Q5T2S8 1044 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 SYCE2Q6PIF2 218 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 CYP4Z2PQ8N1L4 340 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 FAM109AQ8N4B1 249 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 CHCHD4Q8N4Q1 142 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 ATG16L2Q8NAA4 619 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 GALNT6Q8NCL4 622 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 BRSK1Q8TDC3 778 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 HRASLS5Q96KN8 279 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 GPR21Q99679 349 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 CHCHD6Q9BRQ6 235 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 POLR1EQ9GZS1 481 aaKnown RBP11.54□□□□□ -0.56
LTBR-203ENST00000441074 MKRN2Q9H000 416 aaKnown RBP11.54□□□□□ -0.56
LTBR-203ENST00000441074 C3orf14Q9HBI5 128 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 DIABLOQ9NR28 239 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 PCDHGA6Q9Y5G7 932 aa11.54□□□□□ -0.56
LTBR-203ENST00000441074 NLRC5Q86WI3 1866 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 IGLV3-10A0A075B6K4 115 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 A0A0G2JMP0 313 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 CLCA1A8K7I4 914 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 TMEM189-UBE2V1I3L0A0 370 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 ERN1O75460 977 aaKnown RBP11.53□□□□□ -0.56
LTBR-203ENST00000441074 CCNDBP1O95273 360 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 HAPLN1P10915 354 aaPredicted RBP11.53□□□□□ -0.56
LTBR-203ENST00000441074 TNFSF8P32971 234 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 OLR1P78380 273 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 MAD2L1Q13257 205 aaPredicted RBP11.53□□□□□ -0.56
LTBR-203ENST00000441074 MRPL58Q14197 206 aaKnown RBP11.53□□□□□ -0.56
LTBR-203ENST00000441074 PTGR1Q14914 329 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 ABRAXAS2Q15018 415 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 GPAT3Q53EU6 434 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 ARMCX4Q5H9R4 360 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 FAHD1Q6P587 224 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 LIX1LQ8IVB5 337 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 FAM20CQ8IXL6 584 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 CACTIN-AS1Q8N1I8 211 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 DNAJC22Q8N4W6 341 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 OR13C4Q8NGS5 318 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 GGHQ92820 318 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 BADQ92934 168 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 COL21A1Q96P44 957 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 HBEGFQ99075 208 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 MYOCQ99972 504 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 RUBCNLQ9H714 662 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 CCL27Q9Y4X3 112 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 MYO16Q9Y6X6 1858 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 MTMR11A4FU01 709 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 WNT9AO14904 365 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 ZNF682O95780 498 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 CD72P21854 359 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 OR1D2P34982 312 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 RGS19P49795 217 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 TBX4P57082 545 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 RPL38P63173 70 aaKnown RBP11.53□□□□□ -0.56
LTBR-203ENST00000441074 AFTPHQ6ULP2 937 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 MON1AQ86VX9 555 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 C10orf111Q8N326 155 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 BLOC1S5Q8TDH9 187 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 PSMG2Q969U7 264 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 CRELD1Q96HD1 420 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 TRNT1Q96Q11 434 aaKnown RBP11.53□□□□□ -0.56
LTBR-203ENST00000441074 OR52E6Q96RD3 313 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 TTPALQ9BTX7 342 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 CLMPQ9H6B4 373 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 RANGRFQ9HD47 186 aaPredicted RBP11.53□□□□□ -0.56
LTBR-203ENST00000441074 DYRK4Q9NR20 520 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 ASAH2Q9NR71 780 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 SPASTQ9UBP0 616 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 KCNN3Q9UGI6 736 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 SCML2Q9UQR0 700 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 VPS9D1Q9Y2B5 631 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 SAMHD1Q9Y3Z3 626 aaKnown RBP11.53□□□□□ -0.56
LTBR-203ENST00000441074 PCDHB5Q9Y5E4 795 aa11.53□□□□□ -0.56
LTBR-203ENST00000441074 PLK4O00444 970 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 SCAMP3O14828 347 aaKnown RBP11.52□□□□□ -0.57
LTBR-203ENST00000441074 POLR1CO15160 346 aaPredicted RBP11.52□□□□□ -0.57
LTBR-203ENST00000441074 KIAA0513O60268 411 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 TSPAN12O95859 305 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 FABP3P05413 133 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 PRSS56P0CW18 603 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 ABHD18Q0P651 414 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 EFEMP1Q12805 493 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 TAF10Q12962 218 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 TARDBPQ13148 414 aaKnown RBP eCLIP11.52□□□□□ -0.57
LTBR-203ENST00000441074 SLAMF1Q13291 335 aa11.52□□□□□ -0.57
LTBR-203ENST00000441074 CAMK2GQ13555 558 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms