RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 FBXO36Q8NEA4 188 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 OR2A5Q96R48 311 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 SLC29A3Q9BZD2 475 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 TMEM184CQ9NVA4 438 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 C14orf105Q9NVL8 296 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 SNX24Q9Y343 169 aa18.9■□□□□ 0.62
SHROOM1-204ENST00000440118 A0A0A6YYC8 382 aaPredicted RBP18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 VSTM2BA6NLU5 285 aa18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 I3L1I5 382 aaPredicted RBP18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 CXCR2P25025 360 aa18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 VARSP26640 1264 aaKnown RBP18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 RELAQ04206 551 aa18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 MGAT5Q09328 741 aa18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 VWA2Q5GFL6 755 aa18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 STEAP4Q687X5 459 aa18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 CAPN13Q6MZZ7 669 aaPredicted RBP18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 KIRREL2Q6UWL6 708 aa18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 CAPN12Q6ZSI9 719 aa18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 PARP9Q8IXQ6 854 aa18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 ZBED8Q8IZ13 594 aa18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 VWA7Q9Y334 891 aa18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 SPENQ96T58 3664 aaKnown RBP18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 CNTRLQ7Z7A1 2325 aa18.89■□□□□ 0.61
SHROOM1-204ENST00000440118 SCN3AQ9NY46 2000 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 P2RX6O15547 441 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 HEXBP07686 556 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 FDXRP22570 491 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 RPL21P46778 160 aaKnown RBP18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 CD97P48960 835 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 AP1S2P56377 157 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 TIAL1Q01085 375 aaKnown RBP eCLIP18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 INPP5JQ15735 1006 aaPredicted RBP18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 PHKG1Q16816 387 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 MFSD4BQ5TF39 518 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 AGAP7PQ5VUJ5 663 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 STRA8Q7Z7C7 330 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 IQCKQ8N0W5 287 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 OR11G2Q8NGC1 345 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 ATL1Q8WXF7 558 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 AGAP4Q96P64 663 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 WDR83Q9BRX9 315 aaKnown RBP18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 HAUS8Q9BT25 410 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 DPH5Q9H2P9 285 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 ZNF552Q9H707 407 aaPredicted RBP18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 MKKSQ9NPJ1 570 aaPredicted RBP18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 B3GNT3Q9Y2A9 372 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 SHANK1Q9Y566 2161 aa18.88■□□□□ 0.61
SHROOM1-204ENST00000440118 GUCA1CO95843 209 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 CDH1P12830 882 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 CASQ1P31415 396 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 EMP2P54851 167 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 MRPS25P82663 173 aaKnown RBP18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 UBAP2LQ14157 1087 aaKnown RBP18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 FASTKD3Q14CZ7 662 aaKnown RBP18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 PRR30Q53SZ7 412 aaPredicted RBP18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 FAAH2Q6GMR7 532 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 TBC1D19Q8N5T2 526 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 GALNT11Q8NCW6 608 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 ZCCHC10Q8TBK6 192 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 C8orf44Q96CB5 159 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 THOC3Q96J01 351 aaKnown RBP18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 OLFM1Q99784 485 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 LHPPQ9H008 270 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 EPS8L2Q9H6S3 715 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 SYNPO2LQ9H987 977 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 ZNF160Q9HCG1 818 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 NSMCE4AQ9NXX6 385 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 TXNDC16Q9P2K2 825 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 MAP4K5Q9Y4K4 846 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 COL12A1Q99715 3063 aa18.87■□□□□ 0.61
SHROOM1-204ENST00000440118 ESPL1Q14674 2120 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 NSG1A0A0A6YYJ2 146 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 FAM95CA0A1B0GW59 222 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 IDSB3KWA1 339 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 HPP00738 406 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 SLC35G6P0C7Q6 338 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 GNLYP22749 145 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 UQCRFS1P47985 274 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 PGGT1BP53609 377 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 SLC12A2P55011 1212 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 SOX8P57073 446 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 EEF1A2Q05639 463 aaKnown RBP18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 FAM53BQ14153 422 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 FRG1Q14331 258 aaKnown RBP18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 LCTLQ6UWM7 567 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 FRA10AC1Q70Z53 315 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 MAATS1Q7Z4T9 603 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 FAM26EQ8N5C1 309 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 Q8NA96 180 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 CAMKVQ8NCB2 501 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 PYCR2Q96C36 320 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 THAP11Q96EK4 314 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 VPS39Q96JC1 886 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 CNDP1Q96KN2 507 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 PLAC1Q9HBJ0 212 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 SH2B3Q9UQQ2 575 aa18.86■□□□□ 0.61
SHROOM1-204ENST00000440118 IGLV3-12A0A075B6K2 115 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 FEZF1A0PJY2 475 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 FAM187AA6NFU0 413 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 TSPAN12O95859 305 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms