RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 POU3F3P20264 500 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-204ENST00000438964 HNF4AP41235 474 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 KRT6CP48668 564 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 RPS14P62263 151 aaKnown RBP12.97□□□□□ -0.33
ACTN1-204ENST00000438964 PARP15Q460N3 678 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.97□□□□□ -0.33
ACTN1-204ENST00000438964 C10orf62Q5T681 223 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-204ENST00000438964 FAM180BQ6P0A1 224 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 ASB15Q8WXK1 588 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 SLC7A6Q92536 515 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 APIPQ96GX9 242 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 TNFRSF21O75509 655 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 OTCP00480 354 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 IL6P05231 212 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 KDELR2P33947 212 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 OR3A3P47888 321 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 CLCN7P51798 805 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 ZNF140P52738 457 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-204ENST00000438964 TWF1Q12792 350 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 EFR3AQ14156 821 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 TMPRSS11AQ6ZMR5 421 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 SERPINB11Q96P15 392 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 SIGLEC11Q96RL6 698 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 HDHD5Q9BXW7 423 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 LINC00597Q9H2U6 94 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 ZNF226Q9NYT6 803 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 HSPB11Q9Y547 144 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 CDH23Q9H251 3354 aa12.96□□□□□ -0.33
ACTN1-204ENST00000438964 CCDC182A6NF36 153 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 ARL5CA6NH57 179 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 EVPLLA8MZ36 301 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 FAM220BPB1ANY3 271 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 SNAI1O95863 264 aaPredicted RBP12.96□□□□□ -0.34
ACTN1-204ENST00000438964 ALPIP09923 528 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 OGNP20774 298 aaKnown RBP12.96□□□□□ -0.34
ACTN1-204ENST00000438964 HOXC13P31276 330 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 CXCR4P61073 352 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 SSX1Q16384 188 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 LEXMQ3ZCV2 418 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 TUBA3EQ6PEY2 450 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 DPY19L3Q6ZPD9 716 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 TIGD4Q8IY51 512 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 OR4M1Q8NGD0 313 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 C11orf16Q9NQ32 467 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 MKLN1Q9UL63 735 aa12.96□□□□□ -0.34
ACTN1-204ENST00000438964 SAMD4AQ9UPU9 718 aaKnown RBP12.96□□□□□ -0.34
ACTN1-204ENST00000438964 TNS1Q9HBL0 1735 aaKnown RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 STX7O15400 261 aaKnown RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 SOX14O95416 240 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 POLR2EP19388 210 aaKnown RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 PCSK1P29120 753 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 UGT2B10P36537 528 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 MAGEA11P43364 429 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 VEPH1Q14D04 833 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 INO80DQ53TQ3 878 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 YIF1BQ5BJH7 314 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 PTRHD1Q6GMV3 140 aaKnown RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 TMIGD1Q6UXZ0 262 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 AMIGO1Q86WK6 493 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 SPATA2LQ8IUW3 424 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 UMODL1-AS1Q8N2C9 162 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 IPCEF1Q8WWN9 437 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 SELENOMQ8WWX9 145 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 MYDGFQ969H8 173 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 YARS2Q9Y2Z4 477 aaKnown RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 CFAP20Q9Y6A4 193 aaKnown RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 PTCH2Q9Y6C5 1203 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 PRSS21Q9Y6M0 314 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 HTTP42858 3142 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 TRBV5-3A0A0A0MS03 114 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 FZD9O00144 591 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 FPGTO14772 594 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 YY2O15391 372 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 TEX28O15482 410 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 ESR1P03372 595 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 YES1P07947 543 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 MYL9P24844 172 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 PTPN6P29350 595 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 DDOSTP39656 456 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 TBCEQ15813 527 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 AFTPHQ6ULP2 937 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 WDR53Q7Z5U6 358 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 FAM124AQ86V42 546 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 BPHLQ86WA6 291 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 CALHM3Q86XJ0 350 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 NLGN4YQ8NFZ3 816 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 GPR150Q8NGU9 434 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 DEDD2Q8WXF8 326 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 NELL1Q92832 810 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 COPS8Q99627 209 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 NLE1Q9NVX2 485 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-204ENST00000438964 UCKL1Q9NWZ5 548 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 V9GYH0 126 aa12.95□□□□□ -0.34
ACTN1-204ENST00000438964 CBX4O00257 560 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 KLK8O60259 260 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 CCNDBP1O95273 360 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 KCNK5O95279 499 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 SLC25A27O95847 323 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 PSKH1P11801 424 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 HLA-DPA1P20036 260 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms