RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CCDC120Q96HB5 630 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 CASD1Q96PB1 797 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 UPK3BL1B0FP48 263 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 UPK3BL2E5RIL1 263 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 OAS1P00973 400 aaKnown RBP10.9□□□□□ -0.66
SCN4A-201ENST00000435607 BPGMP07738 259 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 HYAL2Q12891 473 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 NOMO1Q15155 1222 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 EEF1DP3Q658K8 133 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 DEFB119Q8N690 84 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 CYB5D2Q8WUJ1 264 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 GFM1Q96RP9 751 aaKnown RBP10.9□□□□□ -0.66
SCN4A-201ENST00000435607 SLC35A5Q9BS91 424 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 VNN3Q9NY84 501 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 NLGN3Q9NZ94 848 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 SCP2D1Q9UJQ7 156 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 PCDHB10Q9UN67 800 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 RPL26L1Q9UNX3 145 aaKnown RBP10.9□□□□□ -0.66
SCN4A-201ENST00000435607 TLL2Q9Y6L7 1015 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 ADAMTS13Q76LX8 1427 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 SLIT1O75093 1534 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 SAP18O00422 153 aaKnown RBP10.9□□□□□ -0.66
SCN4A-201ENST00000435607 SLC7A4O43246 635 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 SOX30O94993 753 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 UNC5CO95185 931 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 USP43Q70EL4 1123 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 TM9SF2Q99805 663 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 DHX33Q9H6R0 707 aaKnown RBP10.9□□□□□ -0.66
SCN4A-201ENST00000435607 PPP4R1LQ9P1A2 415 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 FAM237AA0A1B0GTK4 181 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 H3BNX3 289 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 CXCR6O00574 342 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 BRINP1O60477 761 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 RPP14O95059 124 aaKnown RBP10.9□□□□□ -0.66
SCN4A-201ENST00000435607 FMO1Q01740 532 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 CAMK2DQ13557 499 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 ANKRD26P1Q6NSI1 321 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 ABHD15Q6UXT9 468 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 UTS2BQ765I0 119 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 CMC1Q7Z7K0 106 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 C9orf43Q8TAL5 461 aaPredicted RBP10.9□□□□□ -0.66
SCN4A-201ENST00000435607 OR1F2PQ96R84 312 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 MAPKAP1Q9BPZ7 522 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 PLEKHA3Q9HB20 300 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 ERVK-5Q9HDB9 667 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 NGBQ9NPG2 151 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 FLRT1Q9NZU1 646 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 FKBPLQ9UIM3 349 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 SQORQ9Y6N5 450 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 DPP6P42658 865 aa10.9□□□□□ -0.67
SCN4A-201ENST00000435607 LILRA4P59901 499 aa10.9□□□□□ -0.67
SCN4A-201ENST00000435607 SCGB2A2Q13296 93 aa10.9□□□□□ -0.67
SCN4A-201ENST00000435607 BOLLQ8N9W6 283 aaKnown RBP10.9□□□□□ -0.67
SCN4A-201ENST00000435607 MOAP1Q96BY2 351 aa10.9□□□□□ -0.67
SCN4A-201ENST00000435607 RAB39BQ96DA2 213 aa10.9□□□□□ -0.67
SCN4A-201ENST00000435607 MMABQ96EY8 250 aaPredicted RBP10.9□□□□□ -0.67
SCN4A-201ENST00000435607 LPIN3Q9BQK8 851 aa10.9□□□□□ -0.67
SCN4A-201ENST00000435607 CHIAQ9BZP6 476 aa10.9□□□□□ -0.67
SCN4A-201ENST00000435607 STXBP5LQ9Y2K9 1186 aa10.9□□□□□ -0.67
SCN4A-201ENST00000435607 USP32Q8NFA0 1604 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 LOC102723532A0A0G2JNH3 316 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 CILPO75339 1184 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 ZNF12P17014 697 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 RPL17P18621 184 aaKnown RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 GGT2P36268 569 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 TAS2R43P59537 309 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 MXD1Q05195 221 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 CYP27C1Q4G0S4 372 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 PQLC1Q8N2U9 271 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 FAM47BQ8NA70 645 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 STOML3Q8TAV4 291 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 KCTD7Q96MP8 289 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 COL21A1Q96P44 957 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 UNC93B1Q9H1C4 597 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 GRHL1Q9NZI5 618 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 SNX10Q9Y5X0 201 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 TISP43B9A030 160 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 BLOC1S5-TXNDC5H3BN57 136 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 MFSD11O43934 449 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 YAP1P46937 504 aaKnown RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 GRK1Q15835 563 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 FRMD7Q6ZUT3 714 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 ZNF572Q7Z3I7 529 aaPredicted RBP10.89□□□□□ -0.67
SCN4A-201ENST00000435607 KBTBD6Q86V97 674 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 IL17RCQ8NAC3 791 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 PSMG2Q969U7 264 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 USP29Q9HBJ7 922 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 GKN1Q9NS71 199 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 NUDT15Q9NV35 164 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 GPR34Q9UPC5 381 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 VAMP1P23763 118 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 FASLGP48023 281 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 FOXRED2Q8IWF2 684 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 OR10A6Q8NH74 314 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 PPP1R35Q8TAP8 253 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 FAXDC2Q96IV6 333 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 NODALQ96S42 347 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 TBX5Q99593 518 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 B3GNT5Q9BYG0 378 aa10.89□□□□□ -0.67
SCN4A-201ENST00000435607 EIF2B4Q9UI10 523 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms