RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 MCIDASD6RGH6 385 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 KLK1P06870 262 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 UQCRC2P22695 453 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 GPR107Q5VW38 600 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 DPY19L2P1Q6NXN4 242 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.2□□□□□ -0.62
PTCH1-208ENST00000430669 C9orf43Q8TAL5 461 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-208ENST00000430669 HMGB4Q8WW32 186 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 FKBP10Q96AY3 582 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 REXO4Q9GZR2 422 aaKnown RBP11.2□□□□□ -0.62
PTCH1-208ENST00000430669 PALMDQ9NP74 551 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 RNF11Q9Y3C5 154 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 CBFA2T3O75081 653 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 RBBP4Q09028 425 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 SNAPC1Q16533 368 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 EML3Q32P44 896 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 CEP78Q5JTW2 689 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 FAM91A1Q658Y4 838 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 TRAF7Q6Q0C0 670 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 KDELC1Q6UW63 502 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 C3orf58Q8NDZ4 430 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 BADQ92934 168 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 UTS2RQ9UKP6 389 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 DAG1Q14118 895 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 CCDC92Q53HC0 331 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-208ENST00000430669 OR4C6Q8NH72 309 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 ART5Q96L15 291 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 FARSBQ9NSD9 589 aaKnown RBP11.2□□□□□ -0.62
PTCH1-208ENST00000430669 MYCLP1P12525 358 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-208ENST00000430669 MAT2AP31153 395 aaKnown RBP11.2□□□□□ -0.62
PTCH1-208ENST00000430669 ALDH3A2P51648 485 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 DHCR24Q15392 516 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 C6orf136Q5SQH8 315 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 JAZF1Q86VZ6 243 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 SCAIQ8N9R8 606 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 NAT14Q8WUY8 206 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 REEP4Q9H6H4 257 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 PTTG2Q9NZH5 202 aa11.2□□□□□ -0.62
PTCH1-208ENST00000430669 XKRYO14609 159 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 TMCC2O75069 709 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 ALOX5P09917 674 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 ZNF140P52738 457 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-208ENST00000430669 TUBA4AP68366 448 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 ZNF630Q2M218 657 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-208ENST00000430669 ERMP1Q7Z2K6 904 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 C14orf105Q9NVL8 296 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 PCDHGB7Q9Y5F8 929 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 AP1M2Q9Y6Q5 423 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 TGFB1P01137 390 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 JUPP14923 745 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 BPIP17213 487 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 HTR1EP28566 365 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 ETV3P41162 512 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 TYSND1Q2T9J0 566 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 ADGRG6Q86SQ4 1221 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 CLDN19Q8N6F1 224 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 PITHD1Q9GZP4 211 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-208ENST00000430669 TM9SF3Q9HD45 589 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 IGSF5Q9NSI5 407 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 SCN2AQ99250 2005 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 GSK3BP49841 420 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 BLOC1S3Q6QNY0 202 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 ARHGAP22Q7Z5H3 698 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 C1orf52Q8N6N3 182 aaKnown RBP11.19□□□□□ -0.62
PTCH1-208ENST00000430669 ANKRD49Q8WVL7 239 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 DGAT2Q96PD7 388 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 CKLFQ9UBR5 152 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 DNMT3AQ9Y6K1 912 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-208ENST00000430669 CHURC1-FNTBB4DL54 471 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 G3V2L1 256 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 NOBOXO60393 691 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 UNC50Q53HI1 259 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 SMYD1Q8NB12 490 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 STON2Q8WXE9 905 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 OR1I1O60431 355 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 CREG1O75629 220 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 HPRP00739 348 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 NCK1P16333 377 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 PLA2G16P53816 162 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 TRIM71Q2Q1W2 868 aaKnown RBP11.19□□□□□ -0.62
PTCH1-208ENST00000430669 NOXRED1Q6NXP6 359 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 ZNF671Q8TAW3 534 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 LRCH3Q96II8 777 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 MATN4O95460 622 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 GRHL2Q6ISB3 625 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.19□□□□□ -0.62
PTCH1-208ENST00000430669 PYCR2Q96C36 320 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 SLC39A13Q96H72 371 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 NDRG2Q9UN36 371 aaKnown RBP11.19□□□□□ -0.62
PTCH1-208ENST00000430669 BTBD3Q9Y2F9 522 aa11.19□□□□□ -0.62
PTCH1-208ENST00000430669 TMEM150CB9EJG8 249 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 H0YAE9 185 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 ALOX12P18054 663 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 NUDT1P36639 197 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 BDKRB1P46663 353 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 STK19P49842 368 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 RAB14P61106 215 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 HMGCS1Q01581 520 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 MPP2Q14168 576 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 RNF44Q7L0R7 432 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms