RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 NKG7Q16617 165 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 CDKN3Q16667 212 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 DUOXA1Q1HG43 343 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 CTU2Q2VPK5 515 aaKnown RBP8.44□□□□□ -1.06
GABPB1-205ENST00000429662 TRIM16LQ309B1 348 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 C18orf21Q32NC0 220 aaPredicted RBP8.44□□□□□ -1.06
GABPB1-205ENST00000429662 PLEKHG6Q3KR16 790 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 PLEKHS1Q5SXH7 462 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 MPP7Q5T2T1 576 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 SYT6Q5T7P8 510 aaPredicted RBP8.44□□□□□ -1.06
GABPB1-205ENST00000429662 CPZQ66K79 652 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 SUSD1Q6UWL2 747 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 DET1Q7L5Y6 550 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 CHST15Q7LFX5 561 aaPredicted RBP8.44□□□□□ -1.06
GABPB1-205ENST00000429662 PRSS48Q7RTY5 328 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 TSPYL5Q86VY4 417 aaPredicted RBP8.44□□□□□ -1.06
GABPB1-205ENST00000429662 FAM217AQ8IXS0 508 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 CRIPAKQ8N1N5 446 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 SLC15A4Q8N697 577 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 TMCO5AQ8N6Q1 288 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 PAF1Q8N7H5 531 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 DCBLD1Q8N8Z6 715 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 OR7A2PQ8NGA2 310 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 NETO1Q8TDF5 533 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 PHF10Q8WUB8 498 aaKnown RBP8.44□□□□□ -1.06
GABPB1-205ENST00000429662 SNRNP27Q8WVK2 155 aaKnown RBP8.44□□□□□ -1.06
GABPB1-205ENST00000429662 COL26A1Q96A83 441 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 ALG14Q96F25 216 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 HHIPQ96QV1 700 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 COPS8Q99627 209 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 TBCDQ9BTW9 1192 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 MROQ9BYG7 248 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 ACPTQ9BZG2 426 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 LMAN2LQ9H0V9 348 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 CARS2Q9HA77 564 aaKnown RBP8.44□□□□□ -1.06
GABPB1-205ENST00000429662 ZFP14Q9HCL3 533 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 SERHLQ9NQF3 203 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 PRDM9Q9NQV7 894 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 FBXO8Q9NRD0 319 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 FAM120CQ9NX05 1096 aaKnown RBP8.44□□□□□ -1.06
GABPB1-205ENST00000429662 VPS51Q9UID3 782 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 TMEFF2Q9UIK5 374 aaPredicted RBP8.44□□□□□ -1.06
GABPB1-205ENST00000429662 LSM7Q9UK45 103 aaKnown RBP8.44□□□□□ -1.06
GABPB1-205ENST00000429662 FNDC3AQ9Y2H6 1198 aaKnown RBP8.44□□□□□ -1.06
GABPB1-205ENST00000429662 PPIL1Q9Y3C6 166 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 LAMA5O15230 3695 aa8.44□□□□□ -1.06
GABPB1-205ENST00000429662 KCNE1BA0A087WTH5 132 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 RFXANKO14593 260 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 FFAR3O14843 346 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 GPR42O15529 346 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 B4GAT1O43505 415 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 NUAK1O60285 661 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 NOBOXO60393 691 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 ABLIM3O94929 683 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 EPN2O95208 641 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 EFEMP2O95967 443 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 PDYNP01213 254 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 FABP3P05413 133 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 HTR1AP08908 422 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 BPIP17213 487 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 GPX2P18283 190 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 ACVR2AP27037 513 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 MZF1P28698 734 aaPredicted RBP8.43□□□□□ -1.06
GABPB1-205ENST00000429662 HNF1BP35680 557 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 PIGAP37287 484 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 CSKP41240 450 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 KIR3DL1P43629 444 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 PSMD7P51665 324 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 SGSHP51688 502 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 TUBA1BP68363 451 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 TEKQ02763 1124 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 ITGADQ13349 1161 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 ELOAQ14241 798 aaKnown RBP8.43□□□□□ -1.06
GABPB1-205ENST00000429662 GBX1Q14549 363 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 CHRNA6Q15825 494 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 CTF1Q16619 201 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 PHKG1Q16816 387 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 ANKDD1AQ495B1 522 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 LIPJQ5W064 366 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 KDM4DQ6B0I6 523 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 CES5AQ6NT32 575 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 NEK5Q6P3R8 708 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 TUBA3EQ6PEY2 450 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 TREML4Q6UXN2 200 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 LINGO4Q6UY18 593 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 TPGS1Q6ZTW0 290 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 TPRG1Q6ZUI0 275 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 TUBA1AQ71U36 451 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 EIF3MQ7L2H7 374 aaKnown RBP8.43□□□□□ -1.06
GABPB1-205ENST00000429662 HORMAD1Q86X24 394 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 FAM86B1Q8N7N1 296 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 VPS37AQ8NEZ2 397 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 ZNF461Q8TAF7 563 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 MCOLN3Q8TDD5 553 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 FAR1Q8WVX9 515 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 ATL1Q8WXF7 558 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 EID2BQ96D98 161 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 YIPF6Q96EC8 236 aa8.43□□□□□ -1.06
GABPB1-205ENST00000429662 ZNF641Q96N77 438 aaPredicted RBP8.43□□□□□ -1.06
GABPB1-205ENST00000429662 SMIM14Q96QK8 99 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms