RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 TRAPPC5Q8IUR0 188 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 RIMKLAQ8IXN7 391 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 SLC5A8Q8N695 610 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 HJURPQ8NCD3 748 aaPredicted RBP13.32□□□□□ -0.28
SGMS1-203ENST00000429490 IPCEF1Q8WWN9 437 aaPredicted RBP13.32□□□□□ -0.28
SGMS1-203ENST00000429490 UPF1Q92900 1129 aaKnown RBP eCLIP13.32□□□□□ -0.28
SGMS1-203ENST00000429490 TMEM169Q96HH4 297 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 POLR2J2Q9GZM3 115 aaKnown RBP13.32□□□□□ -0.28
SGMS1-203ENST00000429490 MMP27Q9H306 513 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 VNN3Q9NY84 501 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 IL17CQ9P0M4 197 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 TMEM221A6NGB7 291 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 M0QZQ0 153 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 ADAMDEC1O15204 470 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 KIAA0513O60268 411 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 CATP04040 527 aaKnown RBP13.32□□□□□ -0.28
SGMS1-203ENST00000429490 SDC1P18827 310 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 PSMA1P25786 263 aaKnown RBP13.32□□□□□ -0.28
SGMS1-203ENST00000429490 ZNF284Q2VY69 593 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 HIST2H2AA3Q6FI13 130 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 SHQ1Q6PI26 577 aaKnown RBP13.32□□□□□ -0.28
SGMS1-203ENST00000429490 SBSNQ6UWP8 590 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 LMNTD1Q8N9Z9 388 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 OR9Q2Q8NGE9 314 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 RHOXF1Q8NHV9 184 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 ADAMTS16Q8TE57 1224 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 SCAMP4Q969E2 229 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 ITPKCQ96DU7 683 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 ERVK-11Q9UQG0 969 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 SSC5DA1L4H1 1573 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 CCRL2O00421 344 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 COCHO43405 550 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 GADD45GO95257 159 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 IFNA14P01570 189 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 JUNBP17275 347 aaPredicted RBP13.32□□□□□ -0.28
SGMS1-203ENST00000429490 GJA1P17302 382 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 LIPAP38571 399 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 NSG1P42857 185 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 SGSHP51688 502 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 FCGRTP55899 365 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 OLR1P78380 273 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 TXNDC8Q6A555 127 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 C8orf82Q6P1X6 216 aaPredicted RBP13.32□□□□□ -0.28
SGMS1-203ENST00000429490 GPR149Q86SP6 731 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 BBS7Q8IWZ6 715 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 MINDY2Q8NBR6 621 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 PAPD5Q8NDF8 572 aaKnown RBP13.32□□□□□ -0.28
SGMS1-203ENST00000429490 FBXO22Q8NEZ5 403 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 DBF4BQ8NFT6 615 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 DNASE1L2Q92874 299 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 RHBDF1Q96CC6 855 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.32□□□□□ -0.28
SGMS1-203ENST00000429490 HDHD2Q9H0R4 259 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 ACTL8Q9H568 366 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 TLR9Q9NR96 1032 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 ELOVL2Q9NXB9 296 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 COQ9O75208 318 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 PSIP1O75475 530 aaKnown RBP13.31□□□□□ -0.28
SGMS1-203ENST00000429490 RETP07949 1114 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 IFI30P13284 250 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 CLK3P49761 638 aaKnown RBP13.31□□□□□ -0.28
SGMS1-203ENST00000429490 CLDN8P56748 225 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 MEF2AQ02078 507 aaPredicted RBP13.31□□□□□ -0.28
SGMS1-203ENST00000429490 SRSF11Q05519 484 aaKnown RBP13.31□□□□□ -0.28
SGMS1-203ENST00000429490 CTF1Q16619 201 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 IER5LQ5T953 404 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 TSPYL5Q86VY4 417 aaPredicted RBP13.31□□□□□ -0.28
SGMS1-203ENST00000429490 NFKBIDQ8NI38 313 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 CLP1Q92989 425 aaKnown RBP13.31□□□□□ -0.28
SGMS1-203ENST00000429490 PPCDCQ96CD2 204 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 IL26Q9NPH9 171 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 THG1LQ9NWX6 298 aaKnown RBP13.31□□□□□ -0.28
SGMS1-203ENST00000429490 SLCO3A1Q9UIG8 710 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 DYRK1BQ9Y463 629 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 WASH4PA8MWX3 477 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 SMAD6O43541 496 aaKnown RBP13.31□□□□□ -0.28
SGMS1-203ENST00000429490 UPK1BO75841 260 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 ETFAP13804 333 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 HNF1BP35680 557 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 PCBP2Q15366 365 aaKnown RBP eCLIP13.31□□□□□ -0.283e-9■■■■■ 47.4
SGMS1-203ENST00000429490 TCEA2Q15560 299 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 DPY19L1Q2PZI1 675 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 IFI44LQ53G44 452 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 CELF2-AS1Q8N7Q2 184 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 MRPS31Q92665 395 aaKnown RBP13.31□□□□□ -0.28
SGMS1-203ENST00000429490 ART5Q96L15 291 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 CDK5RAP1Q96SZ6 601 aaKnown RBP13.31□□□□□ -0.28
SGMS1-203ENST00000429490 STARD7Q9NQZ5 370 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 B3GNT3Q9Y2A9 372 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 KCNE2Q9Y6J6 123 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 WDR81Q562E7 1941 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 THSD7AQ9UPZ6 1657 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 C2orf78A6NCI8 922 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 H3BM21 787 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 WNT9AO14904 365 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 GABARAPO95166 117 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 PRKAR2AP13861 404 aaKnown RBP13.31□□□□□ -0.28
SGMS1-203ENST00000429490 MYL12AP19105 171 aa13.31□□□□□ -0.28
SGMS1-203ENST00000429490 C10orf62Q5T681 223 aaPredicted RBP13.31□□□□□ -0.28
SGMS1-203ENST00000429490 NEK10Q6ZWH5 1172 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms