RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 DIRAS2Q96HU8 199 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 OR5M11Q96RB7 305 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 FERD3LQ96RJ6 166 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 CPPED1Q9BRF8 314 aaPredicted RBP15.6■□□□□ 0.09
C9orf3-206ENST00000428313 NXF3Q9H4D5 531 aaKnown RBP15.6■□□□□ 0.09
C9orf3-206ENST00000428313 SYNDIG1Q9H7V2 258 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 SNTG1Q9NSN8 517 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 THUMPD1Q9NXG2 353 aaKnown RBP15.6■□□□□ 0.09
C9orf3-206ENST00000428313 CNOT2Q9NZN8 540 aaKnown RBP15.6■□□□□ 0.09
C9orf3-206ENST00000428313 GABRQQ9UN88 632 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 ANKRD36A6QL64 1941 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 FAM240BA0A1B0GVZ2 78 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 ZNF98A6NK75 572 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 WNT9AO14904 365 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 PCDH17O14917 1159 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 PER2O15055 1255 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 KLK8O60259 260 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 PTP4A3O75365 173 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 IL6P05231 212 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 SCG5P05408 212 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 RAB14P61106 215 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 ZMYND11Q15326 602 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 GPR153Q6NV75 609 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 KCT2Q8NC54 265 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 EXOC2Q96KP1 924 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 ZNF382Q96SR6 550 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 PCYT2Q99447 389 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 FOLH1BQ9HBA9 442 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 ARNT2Q9HBZ2 717 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 EMC7Q9NPA0 242 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 EXOSC4Q9NPD3 245 aaKnown RBP15.6■□□□□ 0.09
C9orf3-206ENST00000428313 MGAT4AQ9UM21 535 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 PCDHGB7Q9Y5F8 929 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 HRH3Q9Y5N1 445 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 ARVCFO00192 962 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 ZNF682O95780 498 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 PAHP00439 452 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 RAB3AP20336 220 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 NUDT6P53370 316 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 AP1S2P56377 157 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 ABATP80404 500 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 ALDH6A1Q02252 535 aaKnown RBP15.59■□□□□ 0.09
C9orf3-206ENST00000428313 ABHD18Q0P651 414 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 SCRN3Q0VDG4 424 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 EXOSC2Q13868 293 aaKnown RBP15.59■□□□□ 0.09
C9orf3-206ENST00000428313 ALFQ53S48 1182 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 FAM160B1Q5W0V3 765 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 TRIQKQ629K1 86 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 NADSYN1Q6IA69 706 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 PHACTR4Q8IZ21 702 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 CLDN22Q8N7P3 220 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 CREB3L4Q8TEY5 395 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 SLC25A46Q96AG3 418 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 EPYCQ99645 322 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 DERL2Q9GZP9 239 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 CLEC4MQ9H2X3 399 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-206ENST00000428313 GALNT9Q9HCQ5 603 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 RAD18Q9NS91 495 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 SLC39A1Q9NY26 324 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 STON1Q9Y6Q2 735 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 RNF215Q9Y6U7 377 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 IGKV6-21A0A0C4DH24 114 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 H0YC42 278 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 HRO43593 1189 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 ECI2O75521 394 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 TP53P04637 393 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-206ENST00000428313 CLEC2LP0C7M8 214 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 PTPRAP18433 802 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 ICAM3P32942 547 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 BTG1P62324 171 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 MBTD1Q05BQ5 628 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 FLYWCH1Q4VC44 716 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 DDI2Q5TDH0 399 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 UBE2J2Q8N2K1 259 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 OR10Q1Q8NGQ4 319 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 CREB3L1Q96BA8 519 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 ULK4Q96C45 1275 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 FAM167AQ96KS9 214 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 LDAHQ9H6V9 325 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 ZFP64Q9NPA5 681 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 LYARQ9NX58 379 aaKnown RBP15.59■□□□□ 0.09
C9orf3-206ENST00000428313 ZNF226Q9NYT6 803 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 FBXW11Q9UKB1 542 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 NDRG2Q9UN36 371 aaKnown RBP15.59■□□□□ 0.09
C9orf3-206ENST00000428313 ACTL7AQ9Y615 435 aa15.59■□□□□ 0.09
C9orf3-206ENST00000428313 MROH6A6NGR9 719 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 GFRA2O00451 464 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 LYRM1O43325 122 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 SGTAO43765 313 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 HK1P19367 917 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 ADIGQ0VDE8 80 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 KDELC2Q7Z4H8 507 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 PM20D2Q8IYS1 436 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 CLHC1Q8NHS4 586 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 ZBED6CLQ96FA7 236 aaPredicted RBP15.58■□□□□ 0.08
C9orf3-206ENST00000428313 KCNC2Q96PR1 638 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 RTP3Q9BQQ7 232 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 SIK2Q9H0K1 926 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 HHATLQ9HCP6 504 aa15.58■□□□□ 0.08
C9orf3-206ENST00000428313 SH3BP4Q9P0V3 963 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms