RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 TSSK2Q96PF2 358 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 CTAGE1Q96RT6 745 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 CSF3RQ99062 836 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 NT5C3AQ9H0P0 336 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 RWDD1Q9H446 243 aaPredicted RBP4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 CGNQ9P2M7 1197 aaKnown RBP4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 MYRFQ9Y2G1 1151 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 TMED3Q9Y3Q3 217 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 IQGAP1P46940 1657 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 NUP155O75694 1391 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 PTPRTO14522 1441 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 ARHGAP31Q2M1Z3 1444 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 PRSS46E5RG02 174 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 MATN3O15232 486 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 MAGEB2O15479 319 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 SCO2O43819 266 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 WDR1O75083 606 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 OR6B1O95007 311 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 STAG3L1P0CL83 205 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 MYOD1P15172 320 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 TNFRSF1BP20333 461 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 NR1D1P20393 614 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 PRPHP41219 470 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 SRP54P61011 504 aaKnown RBP4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 RPS18P62269 152 aaKnown RBP4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 DPTQ07507 201 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 DSC1Q08554 894 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 ZNF155Q12901 538 aaPredicted RBP4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 TRAF2Q12933 501 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 LCP2Q13094 533 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 CALCRLQ16602 461 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 PRTGQ2VWP7 1150 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 ODF3L2Q3SX64 289 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 ZNF770Q6IQ21 691 aaPredicted RBP4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 SHC4Q6S5L8 630 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 PACS1Q6VY07 963 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 LAX1Q8IWV1 398 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 RBMXL3Q8N7X1 1067 aaKnown RBP4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 SPATA22Q8NHS9 363 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 FAM216AQ8WUB2 273 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 ABHD8Q96I13 439 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 DCLK3Q9C098 648 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 MIS12Q9H081 205 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 ATG10Q9H0Y0 220 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 NGBQ9NPG2 151 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 ZCCHC3Q9NUD5 404 aaKnown RBP4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 EXTL2Q9UBQ6 330 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 ZNHIT2Q9UHR6 403 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 SIX4Q9UIU6 781 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 ADGRL1O94910 1474 aa4.28□□□□□ -1.72
NUDCD1-202ENST00000427660 IFT172Q9UG01 1749 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 NPC1L1Q9UHC9 1359 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 NINLQ9Y2I6 1382 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 USP32Q8NFA0 1604 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 MAP3K4Q9Y6R4 1608 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 A0A0G2JNG1 304 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 A0A1W2PRB8 838 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 TMEM129A0AVI4 362 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 INAFM1C9JVW0 142 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 MPHOSPH10O00566 681 aaKnown RBP4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 ARPC2O15144 300 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 CLDN14O95500 239 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 TFAP2AP05549 437 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 LIPFP07098 398 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 SP9P0CG40 484 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 KRT3P12035 628 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 SKILP12757 684 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 UGT1A6P19224 532 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 AHRP35869 848 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 VAMP7P51809 220 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 HNRNPFP52597 415 aaKnown RBP4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 ABATP80404 500 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 RASGEF1BQ0VAM2 473 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 CETN1Q12798 172 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 MFAP5Q13361 173 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 KIR2DS5Q14953 304 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 PHKG1Q16816 387 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 KIF19Q2TAC6 998 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 EPC2Q52LR7 807 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 XKR9Q5GH70 373 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 PM20D1Q6GTS8 502 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 OR6B2Q6IFH4 312 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 MEX3BQ6ZN04 569 aaKnown RBP4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 MMD2Q8IY49 270 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 DCP1BQ8IZD4 617 aaKnown RBP4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 OXNAD1Q96HP4 312 aaPredicted RBP4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 CRACR2AQ9BSW2 395 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 EBF3Q9H4W6 596 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 ZDHHC6Q9H6R6 413 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 TRNAU1APQ9NX07 287 aaKnown RBP4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 SMARCAL1Q9NZC9 954 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 ZNF224Q9NZL3 707 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 EXOC7Q9UPT5 735 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 PTGDR2Q9Y5Y4 395 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 HS3ST3A1Q9Y663 406 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 DENND4BO75064 1496 aaPredicted RBP4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 PDS5AQ29RF7 1337 aaKnown RBP4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 CCDC7Q96M83 1385 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 KDM6BO15054 1643 aa4.27□□□□□ -1.73
NUDCD1-202ENST00000427660 MADDQ8WXG6 1647 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms