RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ACDQ96AP0 544 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 GAS2L1Q99501 681 aaPredicted RBP14.07□□□□□ -0.16
PTPN13-203ENST00000427191 IL12RB2Q99665 862 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 PCDHGA2Q9Y5H1 932 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 WNT10BO00744 389 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 TLL1O43897 1013 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 MSL3P1P0C860 447 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 FPR1P21462 350 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 KLRK1P26718 216 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 CHAF1BQ13112 559 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 SGCBQ16585 318 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 DEFB115Q30KQ5 88 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 PLEKHG7Q6ZR37 379 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 MAB21L3Q8N8X9 362 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 MEPEQ9NQ76 525 aaPredicted RBP14.07□□□□□ -0.16
PTPN13-203ENST00000427191 TAS2R8Q9NYW2 309 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 PADI2Q9Y2J8 665 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 CENPBD1B2RD01 187 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 GLT8D1Q68CQ7 371 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 BRAT1Q6PJG6 821 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 SLC24A5Q71RS6 500 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 ASB15Q8WXK1 588 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 FKBP10Q96AY3 582 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 UCKL1Q9NWZ5 548 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 RNF6Q9Y252 685 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 FAM149AA5PLN7 773 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 NOBOXO60393 691 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 FMO3P31513 532 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 GTF2IRD2BQ6EKJ0 949 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 GTF2IRD2Q86UP8 949 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 ARL14Q8N4G2 192 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 C19orf12Q9NSK7 152 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 EIF2B4Q9UI10 523 aaKnown RBP14.07□□□□□ -0.16
PTPN13-203ENST00000427191 LRCH4O75427 683 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 POU2F1P14859 743 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 DPP6P42658 865 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 ANKRD26Q9UPS8 1709 aa14.07□□□□□ -0.16
PTPN13-203ENST00000427191 ARPC4-TTLL3A0A0A6YYG9 625 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 TRIM64CA6NLI5 447 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 FLRT2O43155 660 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 EPHX1P07099 455 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 DGKGP49619 791 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 MAP2K5Q13163 448 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 PSRC1Q6PGN9 363 aaPredicted RBP14.06□□□□□ -0.16
PTPN13-203ENST00000427191 SLC15A3Q8IY34 581 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 METTL25Q8N6Q8 603 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 HSD17B14Q9BPX1 270 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 TREX2Q9BQ50 279 aaPredicted RBP14.06□□□□□ -0.16
PTPN13-203ENST00000427191 ACTL8Q9H568 366 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 Q9N2J8 555 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 MGAT4BQ9UQ53 548 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 E2F3O00716 465 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 KLF11O14901 512 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 FADDQ13158 208 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 PAOXQ6QHF9 649 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 OR14C36Q8NHC7 312 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 CMKLR1Q99788 373 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 GPR88Q9GZN0 384 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 FZD4Q9ULV1 537 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 CYP1B1Q16678 543 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 PGM2L1Q6PCE3 622 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 SMARCD2Q92925 531 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 ARL5AQ9Y689 179 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 CLIC1O00299 241 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 ZNF41P51814 821 aaPredicted RBP14.06□□□□□ -0.16
PTPN13-203ENST00000427191 PGDP52209 483 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 PTPN20Q4JDL3 420 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 C15orf52Q6ZUT6 534 aaKnown RBP14.06□□□□□ -0.16
PTPN13-203ENST00000427191 BORCS7Q96B45 105 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 PYURFQ96I23 114 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 DUS2Q9NX74 493 aaKnown RBP14.06□□□□□ -0.16
PTPN13-203ENST00000427191 SH2B3Q9UQQ2 575 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 DCCP43146 1447 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 TNS2Q63HR2 1409 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 GMFGO60234 142 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 DFNA5O60443 496 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 OR4F21O95013 312 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 CXCL14O95715 111 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 OR1D2P34982 312 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 SCNN1AP37088 669 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 CDH11P55287 796 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 TSPEARQ8WU66 669 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 CHPT1Q8WUD6 406 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 GRHPRQ9UBQ7 328 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 SPATA31D1Q6ZQQ2 1576 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 C13orf42A0A1B0GVH6 325 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 E7EQ34 232 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 HSD11B2P80365 405 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 ANKDD1AQ495B1 522 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 ZNF572Q7Z3I7 529 aaPredicted RBP14.06□□□□□ -0.16
PTPN13-203ENST00000427191 SLC2A11Q9BYW1 496 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 ATG10Q9H0Y0 220 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 MRM3Q9HC36 420 aaKnown RBP14.06□□□□□ -0.16
PTPN13-203ENST00000427191 YAP1P46937 504 aaKnown RBP14.06□□□□□ -0.16
PTPN13-203ENST00000427191 JAM2P57087 298 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 RPA4Q13156 261 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 P4HA3Q7Z4N8 544 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 HERVK_113Q902F9 699 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 SLCO2A1Q92959 643 aa14.06□□□□□ -0.16
PTPN13-203ENST00000427191 FUBP3Q96I24 572 aaKnown RBP eCLIP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms