RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CCNB1IP1Q9NPC3 277 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 DYRK4Q9NR20 520 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 SPASTQ9UBP0 616 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 FABP12A6NFH5 140 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 CLCA1A8K7I4 914 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 E2F3O00716 465 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 PLA2G10O15496 165 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 AP2A2O94973 939 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 TNNI3P19429 210 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 ERP29P30040 261 aaKnown RBP10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 MAN2A2P49641 1150 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 KEAP1Q14145 624 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 SSX1Q16384 188 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 RFX4Q33E94 735 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 TOR1AIP1Q5JTV8 583 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 SAXO2Q658L1 398 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 TMEM65Q6PI78 240 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 KDELC1Q6UW63 502 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 TMIGD1Q6UXZ0 262 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 GPR149Q86SP6 731 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 DNAJC22Q8N4W6 341 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 ZBTB44Q8NCP5 570 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 CHST13Q8NET6 341 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 ATP6V1C2Q8NEY4 427 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 MS4A7Q9GZW8 240 aaPredicted RBP10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 TRIM45Q9H8W5 580 aaPredicted RBP10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 SP110Q9HB58 689 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 B3GNT2Q9NY97 397 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 GPRC5BQ9NZH0 403 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 MED16Q9Y2X0 877 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 PCDHGB2Q9Y5G2 931 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 HAS3O00219 553 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 MATN3O15232 486 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 UGT2B17O75795 530 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 RECQL4O94761 1208 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 APOL3O95236 402 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 WISP3O95389 354 aaPredicted RBP10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 CYP17A1P05093 508 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 CDK1P06493 297 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 GNPDA1P46926 289 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 SCN1BQ07699 218 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 TNK1Q13470 666 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 SLC14A2Q15849 920 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.94□□□□□ -0.664e-7■□□□□ 10.2
SEC61A1-202ENST00000424880 FRMPD2BQ6IN97 320 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 PAQR6Q6TCH4 344 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 PLET1Q6UQ28 207 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 GTPBP3Q969Y2 492 aaKnown RBP10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 SRRQ9GZT4 340 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 SLC22A4Q9H015 551 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 C1orf109Q9NX04 203 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 CCDC59Q9P031 241 aaKnown RBP10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 TRAPPC4Q9Y296 219 aa10.94□□□□□ -0.66
SEC61A1-202ENST00000424880 A0A1W2PQL4 384 aaPredicted RBP10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 LDB2O43679 373 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 PLOD3O60568 738 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 KERAO60938 352 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 NUDT7P0C024 238 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 ACADMP11310 421 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 HSPA7P48741 367 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 CCT3P49368 545 aaKnown RBP10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 KCNQ1P51787 676 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 DAOAP59103 153 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 CXCR4P61073 352 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 IKZF1Q13422 519 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 LRRC32Q14392 662 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 FGFBP1Q14512 234 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 QPRTQ15274 297 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 SF1Q15637 639 aaKnown RBP10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 PTPRNQ16849 979 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 C10orf62Q5T681 223 aaPredicted RBP10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 CIR1Q86X95 450 aaPredicted RBP10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 RASAL3Q86YV0 1011 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 RNF175Q8N4F7 328 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 OR8J3Q8NGG0 315 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 OR56A4Q8NGH8 313 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 HSH2DQ96JZ2 352 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 EXOC2Q96KP1 924 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 SENP8Q96LD8 212 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 SIGLEC11Q96RL6 698 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 NIPSNAP1Q9BPW8 284 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 UQCC2Q9BRT2 126 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 ZC4H2Q9NQZ6 224 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 RBPJLQ9UBG7 517 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 YARS2Q9Y2Z4 477 aaKnown RBP10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 A0A1B0GVC2 190 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 A6NIN4 97 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 WASHC1A8K0Z3 465 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 VPS4BO75351 444 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 SCELO95171 688 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 RPS17P08708 135 aaKnown RBP10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 TACR1P25103 407 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 TIE1P35590 1138 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 GJA5P36382 358 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 UGT8Q16880 541 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 ZC3H12BQ5HYM0 836 aaKnown RBP10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 CREB3L2Q70SY1 520 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 ZNF605Q86T29 641 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 TCTE3Q8IZS6 198 aa10.93□□□□□ -0.66
SEC61A1-202ENST00000424880 VWA5B2Q8N398 1253 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms