RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 STK33Q9BYT3 514 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 TRIM7Q9C029 511 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 VN1R1Q9GZP7 353 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 EPB41L4BQ9H329 900 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 TRABDQ9H4I3 376 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 LUC7LQ9NQ29 371 aaKnown RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 PARVAQ9NVD7 372 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 UBP1Q9NZI7 540 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 PCDHA3Q9Y5H8 950 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 NPFFR2Q9Y5X5 522 aa5.91□□□□□ -1.46
SDCBP-203ENST00000424270 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.91□□□□□ -1.46
SDCBP-203ENST00000424270 LOC105369274A0A096LPK9 316 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 LOC102723532A0A0G2JNH3 316 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 C2orf81A6NN90 581 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 TMCO5BA8MYB1 307 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 G3V3Y1 287 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 ERN1O75460 977 aaKnown RBP5.9□□□□□ -1.46
SDCBP-203ENST00000424270 S1PR4O95977 384 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 PGRP06401 933 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 MMP2P08253 660 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 ATP1B2P14415 290 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-203ENST00000424270 UCHL3P15374 230 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 CHRNB2P17787 502 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 PTPN3P26045 913 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 PEBP1P30086 187 aaKnown RBP5.9□□□□□ -1.46
SDCBP-203ENST00000424270 GJC1P36383 396 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 CPOXP36551 454 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 MAGEA5P43359 124 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 PRLHRP49683 370 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 WNT3P56703 355 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 OR4D2P58180 307 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 GALNT2Q10471 571 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 RPA4Q13156 261 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 TRIM14Q14142 442 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 NOMO1Q15155 1222 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 NSDHLQ15738 373 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 DPYSL2Q16555 572 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 FBXL19-AS1Q494R0 122 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 MIDNQ504T8 468 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 RGS9BPQ6ZS82 235 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 MON1BQ7L1V2 547 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 LUZP2Q86TE4 346 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 OR4N4Q8N0Y3 316 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 LIX1Q8N485 282 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 KIF2BQ8N4N8 673 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 RAB42Q8N4Z0 105 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 LMNTD1Q8N9Z9 388 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 TNIP2Q8NFZ5 429 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 CFAP61Q8NHU2 1237 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 ELMO1Q92556 727 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 ULK4Q96C45 1275 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 MVB12AQ96EY5 273 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 C10orf90Q96M02 699 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 PCDHB18PQ96TA0 734 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 MIPEPQ99797 713 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 DEFB126Q9BYW3 111 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 TGIF2Q9GZN2 237 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 DRC3Q9H069 523 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 FAM96AQ9H5X1 160 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 SMOXQ9NWM0 555 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 ZNF226Q9NYT6 803 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 KCMF1Q9P0J7 381 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 ZNF629Q9UEG4 869 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-203ENST00000424270 MAN1B1Q9UKM7 699 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 LIPGQ9Y5X9 500 aa5.9□□□□□ -1.46
SDCBP-203ENST00000424270 ANK2Q01484 3957 aa5.9□□□□□ -1.47
SDCBP-203ENST00000424270 TRGV5A0A0B4J1U4 118 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 FAM237AA0A1B0GTK4 181 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 GRID2IPA4D2P6 1211 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 OR2W5A6NFC9 320 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 CDK2AP1O14519 115 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 AQP7O14520 342 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 GAPDHSO14556 408 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-203ENST00000424270 CTSVO60911 334 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 CDC123O75794 336 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-203ENST00000424270 SRP72O76094 671 aaKnown RBP5.89□□□□□ -1.47
SDCBP-203ENST00000424270 AP2A1O95782 977 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 RPN2P04844 631 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 ATP1A3P13637 1013 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 EGR1P18146 543 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 ITGALP20701 1170 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 HNF1AP20823 631 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 CD9P21926 228 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 PKLRP30613 574 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 IDUAP35475 653 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 SLC26A3P40879 764 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 XCR1P46094 333 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 CSE1LP55060 971 aaKnown RBP5.89□□□□□ -1.47
SDCBP-203ENST00000424270 SLC26A5P58743 744 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 ACTG1P63261 375 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 TSTA3Q13630 321 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-203ENST00000424270 PTK6Q13882 451 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 USP10Q14694 798 aaKnown RBP5.89□□□□□ -1.47
SDCBP-203ENST00000424270 SLC10A1Q14973 349 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 ABRAXAS2Q15018 415 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 MAN2A1Q16706 1144 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 NDUFA9Q16795 377 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 BOLA3Q53S33 107 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 C6orf52Q5T4I8 152 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 NDUFAF5Q5TEU4 345 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms