RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 OCA2Q04671 838 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 CSHL1Q14406 222 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 SSPNQ14714 243 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 TSNQ15631 228 aaKnown RBP10.44□□□□□ -0.74
USP49-204ENST00000423567 PPP1R3AQ16821 1122 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 GARNL3Q5VVW2 1013 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 TAOK1Q7L7X3 1001 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 TBC1D1Q86TI0 1168 aaPredicted RBP10.44□□□□□ -0.74
USP49-204ENST00000423567 RELL1Q8IUW5 271 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 PLD3Q8IV08 490 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 TCAIMQ8N3R3 496 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 METTL27Q8N6F8 245 aaPredicted RBP10.44□□□□□ -0.74
USP49-204ENST00000423567 OR2Y1Q8NGV0 311 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 C9orf43Q8TAL5 461 aaPredicted RBP10.44□□□□□ -0.74
USP49-204ENST00000423567 ANKRD49Q8WVL7 239 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 PTERQ96BW5 349 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 PYCR2Q96C36 320 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 MRRFQ96E11 262 aaKnown RBP10.44□□□□□ -0.74
USP49-204ENST00000423567 MVB12AQ96EY5 273 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 VPS50Q96JG6 964 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 UNKQ9C0B0 810 aaKnown RBP10.44□□□□□ -0.74
USP49-204ENST00000423567 SEMA4CQ9C0C4 833 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 ZNF304Q9HCX3 659 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 ACSS2Q9NR19 701 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 NINJ2Q9NZG7 142 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 RUVBL1Q9Y265 456 aaKnown RBP10.44□□□□□ -0.74
USP49-204ENST00000423567 HEMK1Q9Y5R4 338 aaPredicted RBP10.44□□□□□ -0.74
USP49-204ENST00000423567 IKBKGQ9Y6K9 419 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 IGSF10Q6WRI0 2623 aa10.44□□□□□ -0.74
USP49-204ENST00000423567 KCNE1BA0A087WTH5 132 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 ARGFXA6NJG6 315 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 KLF7O75840 302 aaPredicted RBP10.43□□□□□ -0.74
USP49-204ENST00000423567 FAM155BO75949 473 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 ACSL3O95573 720 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 ONECUT2O95948 504 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 C1QAP02745 245 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 CD1DP15813 335 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 NPPBP16860 134 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 FBLP22087 321 aaKnown RBP10.43□□□□□ -0.74
USP49-204ENST00000423567 OR1D4P47884 311 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 AVPR1BP47901 424 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 CSNK1G2P78368 415 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 NFATC3Q12968 1075 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 COL9A2Q14055 689 aaPredicted RBP10.43□□□□□ -0.74
USP49-204ENST00000423567 EFTUD2Q15029 972 aaKnown RBP eCLIP10.43□□□□□ -0.74
USP49-204ENST00000423567 ZKSCAN8Q15776 578 aaPredicted RBP10.43□□□□□ -0.74
USP49-204ENST00000423567 HKDC1Q2TB90 917 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 PRTGQ2VWP7 1150 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 FAM69BQ5VUD6 431 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 MRPL14Q6P1L8 145 aaKnown RBP10.43□□□□□ -0.74
USP49-204ENST00000423567 OVCH1Q7RTY7 1134 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 CCDC91Q7Z6B0 441 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 THOC6Q86W42 341 aaKnown RBP10.43□□□□□ -0.74
USP49-204ENST00000423567 GPSM1Q86YR5 675 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 APLFQ8IW19 511 aaPredicted RBP10.43□□□□□ -0.74
USP49-204ENST00000423567 ZNF843Q8N446 348 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 SPATA6LQ8N4H0 392 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 TMEM102Q8N9M5 508 aaPredicted RBP10.43□□□□□ -0.74
USP49-204ENST00000423567 CAMKVQ8NCB2 501 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 ADAMTS17Q8TE56 1095 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 SLC5A11Q8WWX8 675 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 YIPF2Q9BWQ6 316 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 DRC3Q9H069 523 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 SLC26A1Q9H2B4 701 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 CDC42EP4Q9H3Q1 356 aaKnown RBP10.43□□□□□ -0.74
USP49-204ENST00000423567 ACSS3Q9H6R3 686 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 WDR54Q9H977 334 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 CNOT10Q9H9A5 744 aaKnown RBP10.43□□□□□ -0.74
USP49-204ENST00000423567 NMRAL1Q9HBL8 299 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 WWOXQ9NZC7 414 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 ZNF282Q9UDV7 671 aaPredicted RBP10.43□□□□□ -0.74
USP49-204ENST00000423567 IKZF3Q9UKT9 509 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 KCNE2Q9Y6J6 123 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 MAU2Q9Y6X3 613 aa10.43□□□□□ -0.74
USP49-204ENST00000423567 MGAQ8IWI9 3026 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 A0A087X1B8 175 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 NCF1BA6NI72 391 aaPredicted RBP10.42□□□□□ -0.74
USP49-204ENST00000423567 NCF1CA8MVU1 366 aaPredicted RBP10.42□□□□□ -0.74
USP49-204ENST00000423567 B8ZZF3 427 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 C1QL1O75973 258 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 IPO13O94829 963 aaKnown RBP10.42□□□□□ -0.74
USP49-204ENST00000423567 WDR47O94967 919 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 INHBAP08476 426 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 RHOXF2BP0C7M4 288 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 SLC35G6P0C7Q6 338 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 NCF1P14598 390 aaPredicted RBP10.42□□□□□ -0.74
USP49-204ENST00000423567 SLC26A3P40879 764 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 ATP1A4Q13733 1029 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 FAM53BQ14153 422 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 TGFBIQ15582 683 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 LACTB2Q53H82 288 aaPredicted RBP10.42□□□□□ -0.74
USP49-204ENST00000423567 MROH9Q5TGP6 573 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 MED25Q71SY5 747 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 CMC1Q7Z7K0 106 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 MRGPREQ86SM8 312 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 ZNF605Q86T29 641 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 ASPGQ86U10 573 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 MFSD9Q8NBP5 474 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 ABHD11Q8NFV4 315 aa10.42□□□□□ -0.74
USP49-204ENST00000423567 STAG3L4Q8TBR4 150 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms