RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 MAU2Q9Y6X3 613 aa25.17■■□□□ 1.62
CDK9-202ENST00000421939 ARGFXA6NJG6 315 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 FOXL2P58012 376 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 UBAP2Q5T6F2 1119 aaKnown RBP25.16■■□□□ 1.62
CDK9-202ENST00000421939 GARNL3Q5VVW2 1013 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 VN1R4Q7Z5H5 301 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 MRGPREQ86SM8 312 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 SPATA6LQ8N4H0 392 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 ABHD11Q8NFV4 315 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 C9orf43Q8TAL5 461 aaPredicted RBP25.16■■□□□ 1.62
CDK9-202ENST00000421939 THAP11Q96EK4 314 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 MVB12AQ96EY5 273 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 CYTH2Q99418 400 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 SLC26A1Q9H2B4 701 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 ACSS3Q9H6R3 686 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 WDR54Q9H977 334 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 CTSFQ9UBX1 484 aa25.16■■□□□ 1.62
CDK9-202ENST00000421939 KCNE1BA0A087WTH5 132 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 UMODP07911 640 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 CD1DP15813 335 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 GRK3P35626 688 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 HNMTP50135 292 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 CCR8P51685 355 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 ATP6V0D1P61421 351 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 SSPNQ14714 243 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 CMC1Q7Z7K0 106 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 ARHGEF39Q8N4T4 335 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 ABHD17AQ96GS6 310 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 TRIM55Q9BYV6 548 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 ZNF304Q9HCX3 659 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 TLK1Q9UKI8 766 aa25.15■■□□□ 1.62
CDK9-202ENST00000421939 NXT1Q9UKK6 140 aaKnown RBP25.15■■□□□ 1.62
CDK9-202ENST00000421939 MKRN2OSH3BPM6 223 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 DNAJB5O75953 348 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 ACSL3O95573 720 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 BCL6P41182 706 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 CHAF1BQ13112 559 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 ATP1A4Q13733 1029 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 CSHL1Q14406 222 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 NKG7Q16617 165 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 RAPH1Q70E73 1250 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 SLC5A11Q8WWX8 675 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 COL26A1Q96A83 441 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 PTERQ96BW5 349 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 MRRFQ96E11 262 aaKnown RBP25.14■■□□□ 1.62
CDK9-202ENST00000421939 UBXN10Q96LJ8 280 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 IP6K3Q96PC2 410 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 SPSB2Q99619 263 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 FUT8Q9BYC5 575 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 DRC3Q9H069 523 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 ING2Q9H160 280 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 CDC14AQ9UNH5 594 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 DYRK1BQ9Y463 629 aa25.14■■□□□ 1.62
CDK9-202ENST00000421939 FASNP49327 2511 aaKnown RBP25.14■■□□□ 1.61
CDK9-202ENST00000421939 FEZF1A0PJY2 475 aa25.13■■□□□ 1.61
CDK9-202ENST00000421939 STATHP02808 62 aa25.13■■□□□ 1.61
CDK9-202ENST00000421939 SLC35E2BP0CK96 405 aa25.13■■□□□ 1.61
CDK9-202ENST00000421939 FBLP22087 321 aaKnown RBP25.13■■□□□ 1.61
CDK9-202ENST00000421939 CRABP2P29373 138 aa25.13■■□□□ 1.61
CDK9-202ENST00000421939 TGFBIQ15582 683 aa25.13■■□□□ 1.61
CDK9-202ENST00000421939 THOC6Q86W42 341 aaKnown RBP25.13■■□□□ 1.61
CDK9-202ENST00000421939 GPSM1Q86YR5 675 aa25.13■■□□□ 1.61
CDK9-202ENST00000421939 TMEM151BQ8IW70 566 aa25.13■■□□□ 1.61
CDK9-202ENST00000421939 OR4K1Q8NGD4 311 aa25.13■■□□□ 1.61
CDK9-202ENST00000421939 NEIL2Q969S2 332 aa25.13■■□□□ 1.61
CDK9-202ENST00000421939 RHBDF1Q96CC6 855 aa25.13■■□□□ 1.61
CDK9-202ENST00000421939 TSNARE1Q96NA8 513 aa25.13■■□□□ 1.61
CDK9-202ENST00000421939 ACSS2Q9NR19 701 aa25.13■■□□□ 1.61
CDK9-202ENST00000421939 CCDC88CQ9P219 2028 aa25.13■■□□□ 1.61
CDK9-202ENST00000421939 B8ZZF3 427 aa25.12■■□□□ 1.61
CDK9-202ENST00000421939 PRPF4O43172 522 aaKnown RBP eCLIP25.12■■□□□ 1.61
CDK9-202ENST00000421939 GMPRP36959 345 aa25.12■■□□□ 1.61
CDK9-202ENST00000421939 BMPR2Q13873 1038 aa25.12■■□□□ 1.61
CDK9-202ENST00000421939 DSG2Q14126 1118 aa25.12■■□□□ 1.61
CDK9-202ENST00000421939 OR4D1Q15615 310 aa25.12■■□□□ 1.61
CDK9-202ENST00000421939 UAP1Q16222 522 aaPredicted RBP25.12■■□□□ 1.61
CDK9-202ENST00000421939 NDUFA9Q16795 377 aa25.12■■□□□ 1.61
CDK9-202ENST00000421939 LACTB2Q53H82 288 aaPredicted RBP25.12■■□□□ 1.61
CDK9-202ENST00000421939 PPP1R32Q7Z5V6 425 aa25.12■■□□□ 1.61
CDK9-202ENST00000421939 TBC1D1Q86TI0 1168 aaPredicted RBP25.12■■□□□ 1.61
CDK9-202ENST00000421939 SLC22A14Q9Y267 594 aa25.12■■□□□ 1.61
CDK9-202ENST00000421939 PCSK5Q92824 1860 aa25.12■■□□□ 1.61
CDK9-202ENST00000421939 NCF1BA6NI72 391 aaPredicted RBP25.11■■□□□ 1.61
CDK9-202ENST00000421939 VSTM2BA6NLU5 285 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 NCF1CA8MVU1 366 aaPredicted RBP25.11■■□□□ 1.61
CDK9-202ENST00000421939 NCF1P14598 390 aaPredicted RBP25.11■■□□□ 1.61
CDK9-202ENST00000421939 RRADP55042 308 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 MEF2AQ02078 507 aaPredicted RBP25.11■■□□□ 1.61
CDK9-202ENST00000421939 FAM53BQ14153 422 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 CATSPEREQ5SY80 951 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 MROH9Q5TGP6 573 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 MED25Q71SY5 747 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 ASPGQ86U10 573 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 IFT20Q8IY31 132 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 KLHDC8AQ8IYD2 350 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 TCAIMQ8N3R3 496 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 TMEM102Q8N9M5 508 aaPredicted RBP25.11■■□□□ 1.61
CDK9-202ENST00000421939 MFSD9Q8NBP5 474 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 CAMKVQ8NCB2 501 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 KIAA1191Q96A73 305 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms