RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CCKBRP32239 447 aa15.06■□□□□ 0
DDX55-203ENST00000421670 NAA20P61599 178 aa15.06■□□□□ 0
DDX55-203ENST00000421670 GUCY1A3Q02108 690 aa15.06■□□□□ 0
DDX55-203ENST00000421670 STX3Q13277 289 aa15.06■□□□□ 0
DDX55-203ENST00000421670 TRA2AQ13595 282 aaKnown RBP eCLIP15.06■□□□□ 0
DDX55-203ENST00000421670 E2F2Q14209 437 aa15.06■□□□□ 0
DDX55-203ENST00000421670 NAA25Q14CX7 972 aa15.06■□□□□ 0
DDX55-203ENST00000421670 TBCCQ15814 346 aa15.06■□□□□ 0
DDX55-203ENST00000421670 CPSF6Q16630 551 aaKnown RBP eCLIP15.06■□□□□ 0
DDX55-203ENST00000421670 RNF44Q7L0R7 432 aa15.06■□□□□ 0
DDX55-203ENST00000421670 MILR1Q7Z6M3 343 aa15.06■□□□□ 0
DDX55-203ENST00000421670 CUZD1Q86UP6 607 aa15.06■□□□□ 0
DDX55-203ENST00000421670 CDYL2Q8N8U2 506 aa15.06■□□□□ 0
DDX55-203ENST00000421670 ZNF75CPQ92670 426 aaPredicted RBP15.06■□□□□ 0
DDX55-203ENST00000421670 DEPDC7Q96QD5 511 aa15.06■□□□□ 0
DDX55-203ENST00000421670 AIF1LQ9BQI0 150 aa15.06■□□□□ 0
DDX55-203ENST00000421670 TRMOQ9BU70 441 aa15.06■□□□□ 0
DDX55-203ENST00000421670 EFCAB11Q9BUY7 163 aa15.06■□□□□ 0
DDX55-203ENST00000421670 PDE7BQ9NP56 450 aa15.06■□□□□ 0
DDX55-203ENST00000421670 FAM53CQ9NYF3 392 aa15.06■□□□□ 0
DDX55-203ENST00000421670 FAM149AA5PLN7 773 aa15.05■□□□□ -0
DDX55-203ENST00000421670 TMEM114B3SHH9 223 aa15.05■□□□□ -0
DDX55-203ENST00000421670 FFAR3O14843 346 aa15.05■□□□□ -0
DDX55-203ENST00000421670 GPR42O15529 346 aa15.05■□□□□ -0
DDX55-203ENST00000421670 OR1F1O43749 312 aa15.05■□□□□ -0
DDX55-203ENST00000421670 HYAL3O43820 417 aaPredicted RBP15.05■□□□□ -0
DDX55-203ENST00000421670 LCMT2O60294 686 aaKnown RBP15.05■□□□□ -0
DDX55-203ENST00000421670 UGDHO60701 494 aa15.05■□□□□ -0
DDX55-203ENST00000421670 ESRRBO95718 433 aa15.05■□□□□ -0
DDX55-203ENST00000421670 HSPA4LO95757 839 aa15.05■□□□□ -0
DDX55-203ENST00000421670 STATHP02808 62 aa15.05■□□□□ -0
DDX55-203ENST00000421670 GRK3P35626 688 aa15.05■□□□□ -0
DDX55-203ENST00000421670 SERPINB5P36952 375 aa15.05■□□□□ -0
DDX55-203ENST00000421670 BCL6P41182 706 aa15.05■□□□□ -0
DDX55-203ENST00000421670 CASP2P42575 452 aa15.05■□□□□ -0
DDX55-203ENST00000421670 SLC1A6P48664 564 aa15.05■□□□□ -0
DDX55-203ENST00000421670 GYS2P54840 703 aa15.05■□□□□ -0
DDX55-203ENST00000421670 FOXA1P55317 472 aa15.05■□□□□ -0
DDX55-203ENST00000421670 PKNOX1P55347 436 aa15.05■□□□□ -0
DDX55-203ENST00000421670 ABCE1P61221 599 aaKnown RBP15.05■□□□□ -0
DDX55-203ENST00000421670 PCDH1Q08174 1060 aa15.05■□□□□ -0
DDX55-203ENST00000421670 GPR19Q15760 415 aa15.05■□□□□ -0
DDX55-203ENST00000421670 TCHHL1Q5QJ38 904 aaPredicted RBP15.05■□□□□ -0
DDX55-203ENST00000421670 LIPJQ5W064 366 aa15.05■□□□□ -0
DDX55-203ENST00000421670 TTC19Q6DKK2 380 aaPredicted RBP15.05■□□□□ -0
DDX55-203ENST00000421670 FRMPD2BQ6IN97 320 aa15.05■□□□□ -0
DDX55-203ENST00000421670 GRHL2Q6ISB3 625 aa15.05■□□□□ -0
DDX55-203ENST00000421670 KMT5CQ86Y97 462 aa15.05■□□□□ -0
DDX55-203ENST00000421670 MARCH9Q86YJ5 346 aa15.05■□□□□ -0
DDX55-203ENST00000421670 TRIM42Q8IWZ5 723 aa15.05■□□□□ -0
DDX55-203ENST00000421670 D2HGDHQ8N465 521 aa15.05■□□□□ -0
DDX55-203ENST00000421670 ANKRD53Q8N9V6 530 aa15.05■□□□□ -0
DDX55-203ENST00000421670 L3MBTL4Q8NA19 623 aa15.05■□□□□ -0
DDX55-203ENST00000421670 RAB3IL1Q8TBN0 382 aa15.05■□□□□ -0
DDX55-203ENST00000421670 LRRC8CQ8TDW0 803 aa15.05■□□□□ -0
DDX55-203ENST00000421670 CKAP2Q8WWK9 683 aa15.05■□□□□ -0
DDX55-203ENST00000421670 ZFYVE21Q9BQ24 234 aa15.05■□□□□ -0
DDX55-203ENST00000421670 PILRAQ9UKJ1 303 aa15.05■□□□□ -0
DDX55-203ENST00000421670 STK38LQ9Y2H1 464 aa15.05■□□□□ -0
DDX55-203ENST00000421670 FREM2Q5SZK8 3169 aa15.04■□□□□ -0
DDX55-203ENST00000421670 KCNE1BA0A087WTH5 132 aa15.04■□□□□ -0
DDX55-203ENST00000421670 TRBC2A0A5B9 178 aa15.04■□□□□ -0
DDX55-203ENST00000421670 TMEM233B4DJY2 109 aa15.04■□□□□ -0
DDX55-203ENST00000421670 MAP3K7O43318 606 aa15.04■□□□□ -0
DDX55-203ENST00000421670 CAPN1P07384 714 aa15.04■□□□□ -0
DDX55-203ENST00000421670 CTSBP07858 339 aa15.04■□□□□ -0
DDX55-203ENST00000421670 JUPP14923 745 aa15.04■□□□□ -0
DDX55-203ENST00000421670 FOLR1P15328 257 aa15.04■□□□□ -0
DDX55-203ENST00000421670 CSTF2P33240 577 aaKnown RBP eCLIP15.04■□□□□ -0
DDX55-203ENST00000421670 CYP4F2P78329 520 aa15.04■□□□□ -0
DDX55-203ENST00000421670 COL9A2Q14055 689 aaPredicted RBP15.04■□□□□ -0
DDX55-203ENST00000421670 RBBP5Q15291 538 aaKnown RBP15.04■□□□□ -0
DDX55-203ENST00000421670 GGTA1PQ4G0N0 100 aa15.04■□□□□ -0
DDX55-203ENST00000421670 PAGE2BQ5JRK9 111 aa15.04■□□□□ -0
DDX55-203ENST00000421670 ATG16L1Q676U5 607 aa15.04■□□□□ -0
DDX55-203ENST00000421670 CLEC6AQ6EIG7 209 aa15.04■□□□□ -0
DDX55-203ENST00000421670 FBXO42Q6P3S6 717 aa15.04■□□□□ -0
DDX55-203ENST00000421670 TMIGD1Q6UXZ0 262 aa15.04■□□□□ -0
DDX55-203ENST00000421670 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.04■□□□□ -0
DDX55-203ENST00000421670 DNAJC22Q8N4W6 341 aa15.04■□□□□ -0
DDX55-203ENST00000421670 ADAMTS14Q8WXS8 1223 aa15.04■□□□□ -0
DDX55-203ENST00000421670 GRAMD1AQ96CP6 724 aa15.04■□□□□ -0
DDX55-203ENST00000421670 MAGEB18Q96M61 343 aa15.04■□□□□ -0
DDX55-203ENST00000421670 SORT1Q99523 831 aa15.04■□□□□ -0
DDX55-203ENST00000421670 STRADBQ9C0K7 418 aa15.04■□□□□ -0
DDX55-203ENST00000421670 OCIAD1Q9NX40 245 aa15.04■□□□□ -0
DDX55-203ENST00000421670 TRPS1Q9UHF7 1281 aa15.04■□□□□ -0
DDX55-203ENST00000421670 ZNF490Q9ULM2 529 aaPredicted RBP15.04■□□□□ -0
DDX55-203ENST00000421670 FIS1Q9Y3D6 152 aa15.04■□□□□ -0
DDX55-203ENST00000421670 PCDHGA4Q9Y5G9 962 aa15.04■□□□□ -0
DDX55-203ENST00000421670 KNTC1P50748 2209 aa15.04■□□□□ -0
DDX55-203ENST00000421670 LOC105369274A0A096LPK9 316 aa15.03■□□□□ -0
DDX55-203ENST00000421670 LOC102723532A0A0G2JNH3 316 aa15.03■□□□□ -0
DDX55-203ENST00000421670 PMS2P1A4D2B8 440 aa15.03■□□□□ -0
DDX55-203ENST00000421670 HGSO14964 777 aaPredicted RBP15.03■□□□□ -0
DDX55-203ENST00000421670 SNNO75324 88 aaPredicted RBP15.03■□□□□ -0
DDX55-203ENST00000421670 PCNAP12004 261 aa15.03■□□□□ -0
DDX55-203ENST00000421670 HGFP14210 728 aa15.03■□□□□ -0
DDX55-203ENST00000421670 HNF4AP41235 474 aa15.03■□□□□ -0
DDX55-203ENST00000421670 GABRA4P48169 554 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms