RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 SLC30A4O14863 429 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 SKAP2O75563 359 aaPredicted RBP13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 PDYNP01213 254 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 LINC00032P0C843 101 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 CDH1P12830 882 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 AHRP35869 848 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 HTR6P50406 440 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 ERVK-8P63133 956 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 CSNK1G2P78368 415 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 BNIP3Q12983 259 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 SLBPQ14493 270 aaKnown RBP eCLIP13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 PLCL1Q15111 1095 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 DEFB133Q30KQ1 61 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 ATP6AP1LQ52LC2 224 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 TRIM61Q5EBN2 209 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 C6orf136Q5SQH8 315 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 DDIASQ8IXT1 998 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 SELENOMQ8WWX9 145 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 CMTM7Q96FZ5 175 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 CCDC106Q9BWC9 280 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 BRINP2Q9C0B6 783 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 GAREM1Q9H706 876 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 MRPS30Q9NP92 439 aaKnown RBP13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 NMRK1Q9NWW6 199 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 SPHK1Q9NYA1 384 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 ACTR10Q9NZ32 417 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 PCDH15Q96QU1 1955 aa13.7□□□□□ -0.22
SHMT1P1-201ENST00000419974 OR2A25A4D2G3 310 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 FCHO1O14526 889 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 UBDO15205 165 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 ZW10O43264 779 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 UBXN7O94888 489 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 SEMA3DO95025 777 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 IDO1P14902 403 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 VARSP26640 1264 aaKnown RBP13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 PRDX6P30041 224 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 GRK3P35626 688 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 MPLP40238 635 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 ARL1P40616 181 aaPredicted RBP13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 CAPZBP47756 277 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 SCTRP47872 440 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 PHEXP78562 749 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 GPLD1P80108 840 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 CUL3Q13618 768 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 SF1Q15637 639 aaKnown RBP13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 CLPPQ16740 277 aaPredicted RBP13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 LACTB2Q53H82 288 aaPredicted RBP13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 TCHHL1Q5QJ38 904 aaPredicted RBP13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 GALNT18Q6P9A2 607 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 SPESP1Q6UW49 350 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 PAQR7Q86WK9 346 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 ZFAND4Q86XD8 727 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 FAM9CQ8IZT9 166 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 TBC1D19Q8N5T2 526 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 OR2T11Q8NH01 316 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 HUS1BQ8NHY5 278 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 TUBGCP3Q96CW5 907 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 CD180Q99467 661 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 ACPTQ9BZG2 426 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 CAAP1Q9H8G2 361 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 SDR39U1Q9NRG7 319 aaPredicted RBP13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 ABCF3Q9NUQ8 709 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 DNAAF2Q9NVR5 837 aaKnown RBP13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 HRASLS2Q9NWW9 162 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 C1orf109Q9NX04 203 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 SEMA5BQ9P283 1151 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 VPS29Q9UBQ0 182 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 ZFP69BQ9UJL9 534 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 POMT2Q9UKY4 750 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 FIS1Q9Y3D6 152 aa13.69□□□□□ -0.22
SHMT1P1-201ENST00000419974 TRBV23OR9-2A0A075B6M9 112 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 OR6C74A6NCV1 312 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 HNRNPCL1O60812 293 aaKnown RBP13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 CLEC3AO75596 197 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 ATP5HO75947 161 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 CFIP05156 583 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 EZRP15311 586 aaKnown RBP13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 UGT2B7P16662 529 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 PTX3P26022 381 aaPredicted RBP13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 PSMB5P28074 263 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 GRIA3P42263 894 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 MAZP56270 477 aaKnown RBP13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 BNIP1Q12981 228 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 SQLEQ14534 574 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 MANEAQ5SRI9 462 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 MYLK4Q86YV6 388 aaPredicted RBP13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 SFTPA2Q8IWL1 248 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 SLC35F3Q8IY50 421 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 TSPEARQ8WU66 669 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 ERP27Q96DN0 273 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 SLC38A3Q99624 504 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 NRTNQ99748 197 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 ACAT2Q9BWD1 397 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 SLC6A20Q9NP91 592 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 DMRT3Q9NQL9 472 aa13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 FARSBQ9NSD9 589 aaKnown RBP13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 CUEDC1Q9NWM3 386 aaPredicted RBP13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 NOP53Q9NZM5 478 aaKnown RBP13.68□□□□□ -0.22
SHMT1P1-201ENST00000419974 PILRAQ9UKJ1 303 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms